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  Home > Genomes > Dipodomys ordii 76_1 > ENSDORP00000001993

Domain assignment for ENSDORP00000001993 from Dipodomys ordii 76_1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSDORP00000001993
Domain Number 1 Region: 665-916
Classification Level Classification E-value
Superfamily YWTD domain 6.02e-46
Family YWTD domain 0.0000118
Further Details:      
 
Domain Number 2 Region: 258-539
Classification Level Classification E-value
Superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase 4.18e-31
Family Oligoxyloglucan reducing end-specific cellobiohydrolase 0.014
Further Details:      
 
Domain Number 3 Region: 1555-1736
Classification Level Classification E-value
Superfamily Fibronectin type III 1.2e-19
Family Fibronectin type III 0.0029
Further Details:      
 
Domain Number 4 Region: 2-187
Classification Level Classification E-value
Superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase 1.75e-16
Family Oligoxyloglucan reducing end-specific cellobiohydrolase 0.0098
Further Details:      
 
Domain Number 5 Region: 1321-1359
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000117
Family LDL receptor-like module 0.00088
Further Details:      
 
Domain Number 6 Region: 1100-1139
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000072
Family LDL receptor-like module 0.00067
Further Details:      
 
Domain Number 7 Region: 1228-1264
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000995
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 8 Region: 1057-1098
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000262
Family LDL receptor-like module 0.00076
Further Details:      
 
Domain Number 9 Region: 1273-1308
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000249
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 10 Region: 1143-1176
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000511
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 11 Region: 1928-2011
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000243
Family Fibronectin type III 0.0055
Further Details:      
 
Domain Number 12 Region: 1025-1058
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000262
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 13 Region: 1180-1215
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000196
Family LDL receptor-like module 0.0023
Further Details:      
 
Domain Number 14 Region: 1749-1863
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000841
Family Fibronectin type III 0.0079
Further Details:      
 
Weak hits

Sequence:  ENSDORP00000001993
Domain Number - Region: 592-606,921-978
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000235
Family Growth factor receptor domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000001993   Gene: ENSDORG00000002124   Transcript: ENSDORT00000002128
Sequence length 2119
Comment pep:known_by_projection genescaffold:dipOrd1:GeneScaffold_3139:12:98965:1 gene:ENSDORG00000002124 transcript:ENSDORT00000002128 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
VSLNDSHNQMVVHWAGEKSNVIVALARDSLALARPKSSDVYVSYDYGKSFNKISEKLNFG
EGNNTAAVIAQFYHSPADNKRYIFADAYAQYLWITFDFCSTIHGFSIPFRAADLLLHSKA
SNLVMGFDRSHPNKQLWKSDDFGQTWIMIQEHVKSFAWGIDPYDKPNTIYIERHEPAGYS
TVLRSTDFFQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXEYYIADASEDQVFVCVSHSNNRTNLYISEAEGLKFSLSLENVLYYSPG
GAGSDSLVRYFANEPFADFHRVEGLQGVYIATLINGSMNEENLRSVITFDKGGTWEFLQA
PAFTGYGEKIDCELSQGCSLHLAQRLSQLLNLQLRRMPILSKESAPGLIIATGSVGKNLA
SKTNVYISSSAGARWREALPGPHYYTWGDHGGIIMAIAQGMETNELKYSTNEGETWKTFI
FSEQPVFVYGLLTEPGEKSTVFTIFGSNKENVHSWLILQVNATDALGVPCTENDYKLWSP
SDERGNECLLGHKTVFKRRTPHATCFNGEDFDRPVVLSNCSCTREDYECDFGFKLSEDLS
LEVCVPDPEFSGRSYSPPVPCPVGSTYRRTRGYRKISGDTCSGGDVEARLEGELVPCPLA
EENEFILYAMRKSIYRYDLASGATEQLPLSGLRAAVALDFDYEHNCLYWSDLALDSIQRL
CLNGSTGQEVIINSGLETVEALAFEPLSQLLYWVDAGFKKIEVANPDGDFRLTIINSSVL
DRPRALVLVPQEGVLFWTDWGDLKPGIYRSNMDGSAVRRLVSEDVKWPNGISVDEQWIYW
TDAYLDCIERATFSGQQRSLILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQIE
TLGSQLTGLMDIKIFYKGKNTGSNACVPRPCSLLCLPKANNSKSCRCPEGVASSVLPSGV
LMCECPQGYQLKNNTCTKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTT
VCDVDTQFRCQESGTCIPLSYKCDLEDDCGDNSDERHCEMHQCRSEEYNCSSGMCIRSSW
VCDGDNDCRDWSDEANCTAMYHTCEASNFQCHNGHCVPQRWVCDGDADCQDGSDEDPANC
EKKCNGFHCPNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTRFMDFVCKNRQQCLFHSMV
CDGVIQCRDGSDEDPAFAGCSQDPEFHKVCDEFGFQCQNGVCISLIWKCDGMDDCGDYSD
EANCENPTEAPSCSRYFQFRCENGHCIPNRWKCDREDDCGDWSDERDCGDLHVPPSPTPG
PSTCLPNYFRCSHGACVMDTWVCDGYRDCADGSDEEACPTVXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDAPG
NLQLSVHSEAEGVIVCHWAPPVHPHGFIREYIVEYSRTGSKMWASQRAGSNSTEIKDLLP
HTLYTVRXXXXXXXXXXXXXXXXXXXXXXXXXIPPPDIHINSYSENSLSFTLTMGGDTKV
TGYVVNLFWAFDTHKQEKKTLNFPGSSTSHKVGNLTAHTSYEISAWAKTDVGDSPLAFEH
VTTRGVRPPAPSLKAKAINQTAVECVWTGPRNVVYGIFYATSFLDLYRNPKGLTTSLHNK
TVIVGRDEQYLFLVRVLVPYQGPSSDYVVVKMIPDSRLPPRHLHLIHTGKTSAIIKWESP
YDSPDQDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXLLSAPDALKIITENDHVLLFWKSLALKEKQFNESRGYEIHMFDSAVNLTAYLG
NTTDNFFKISNLKMGHNYTFTVQARCLVGSQLCGEPAVLLYDELGSGGAMAAVQDARPTD
VAAVVVPILFLILLSLGVGFAILYTKHRRLQSSFTAFANSHYSSRLGSAIFSSGDDLGED
DEDAPMITGFSDDVPMVIA
Download sequence
Identical sequences ENSDORP00000001993 ENSDORP00000001993

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.