SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000002808 from Dipodomys ordii 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000002808
Domain Number 1 Region: 198-398
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 1.44e-60
Family Reprolysin-like 0.0000234
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000002808   Gene: ENSDORG00000002986   Transcript: ENSDORT00000002988
Sequence length 827
Comment pep:novel genescaffold:dipOrd1:GeneScaffold_3978:2006:13645:-1 gene:ENSDORG00000002986 transcript:ENSDORT00000002988 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRCLQLWLVCVLWPQAIALGSPLPHVEQYEVVWPQRLPGPRARRALLSPAGLYPESVRYV
LGAGGRTFTLNLRKNRALLGSGYTETFLAANGSEVTEQLPEQDHCLYQGHVEGHQDSAAS
LSTCSGLRGFFKVSSAVHLIEPLDGNTGDGPHAVYQAKHLKQRAGASCGVSETSLDNLLG
MRVSAASRPHYRGQLLSPETHYVEMYVVTDSVELQQFRTREAVRSRVLEVVNHVDKLYQE
LNFRVVLVGLEIWSRDKIYISPHANVTLDNFLSWRERTLLGRHHHDNVQLITGRDFVGAT
VGLARVSAVCSRDSGAVNQDHSHSALGVASTMAHELGHNLGMNHDENIPGCYCPASREDG
GCVMAGSLSSKFPKVFSHCSRTDVQELVEMPYTICLANAPDLDTLVGGPVCGNLFXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCQGAADIWLTTAILGCKA
LWQRINSCGTLYCMGGLRPPERGSCVFPSPGGPCRALVMDSSLTRYEPVPEGTRCGEGKV
CWKGVCQDLSVYGEQNCSAQCHNHGVCNHKRECHCHLGWAPPYCAGRLTDAQTGPGSPPL
WGLVALVLLAAVVALAGVIIHHKVRRRGVVPEAAGLPNPLFYGRSRGMSAKETFEGPQLA
STCSRQPPKPTLVPKRPPPAPPAAMSSPAAAVPVYPQQTPDQAKLAPVPPAPPVKPKVGG
PSPRVPQAAHGPKVALQPPVQRRPSAPAGPRKFKPAPADGPVSLSLR
Download sequence
Identical sequences ENSDORP00000002808 ENSDORP00000002808

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]