SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000004674 from Dipodomys ordii 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000004674
Domain Number 1 Region: 3-135
Classification Level Classification E-value
Superfamily C-type lectin-like 6.65e-41
Family C-type lectin domain 0.0000744
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000004674   Gene: ENSDORG00000004998   Transcript: ENSDORT00000004997
Sequence length 143
Comment pep:known_by_projection genescaffold:dipOrd1:GeneScaffold_4979:13784:17823:-1 gene:ENSDORG00000004998 transcript:ENSDORT00000004997 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LVHSCCPLNWEHFQSSCYFFSVDALNWEASVRNCSGMRAQLVVINTPEEQEFLYHTKPRR
REFFIGLSDQVTEGQWLWVDNSPLRKSLSFWDAGEPNNLVTVEDCATIRDSPNPRRNWND
IPCFYAMPRVCEMPEISVWDGKS
Download sequence
Identical sequences ENSDORP00000004674 ENSDORP00000004674

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]