SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000004997 from Dipodomys ordii 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000004997
Domain Number 1 Region: 89-398
Classification Level Classification E-value
Superfamily L domain-like 2.72e-57
Family Leucine rich effector protein YopM 0.039
Further Details:      
 
Domain Number 2 Region: 487-627
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 5.61e-36
Family Gelsolin-like 0.00029
Further Details:      
 
Domain Number 3 Region: 1155-1265
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 5.56e-25
Family Gelsolin-like 0.0009
Further Details:      
 
Domain Number 4 Region: 607-718
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 8.99e-25
Family Gelsolin-like 0.00051
Further Details:      
 
Domain Number 5 Region: 897-941,978-1063
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 2.15e-23
Family Gelsolin-like 0.013
Further Details:      
 
Domain Number 6 Region: 746-855
Classification Level Classification E-value
Superfamily C-terminal, gelsolin-like domain of Sec23/24 3.92e-20
Family C-terminal, gelsolin-like domain of Sec23/24 0.01
Further Details:      
 
Domain Number 7 Region: 24-120
Classification Level Classification E-value
Superfamily L domain-like 4.08e-17
Family Rab geranylgeranyltransferase alpha-subunit, C-terminal domain 0.063
Further Details:      
 
Domain Number 8 Region: 1052-1145
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 0.0000000000000351
Family Gelsolin-like 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000004997   Gene: ENSDORG00000005341   Transcript: ENSDORT00000005342
Sequence length 1270
Comment pep:known_by_projection genescaffold:dipOrd1:GeneScaffold_936:55910:70092:-1 gene:ENSDORG00000005341 transcript:ENSDORT00000005342 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEATGVLPFVRGVDLLGNYFKGGYFPENVKAMTSLRWLKLNHTGLCYLPEELAALQKLEH
LSVSHNNLTTLHGELSSLPSLKAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTECP
RELENAKNMLVLNLSHNSIDTIPNQLFINLTDLLYLDLSENRLESLPPQLRRLVHLQTLV
LNGNPLLHAQLRQIPAMTALQTLHLRNTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPE
CLYTLPSLRRLNLSSNQISELSLCIDQWVHVETLNLSRNQLTSLPSAICKLTKLKKLYLN
SNKLDFDGLPSGIGKLASLEEFMAANNNLELIPESLCRCPKLRKLVLNKNRLVTLPEAIH
FLTEIEVLDVRENPSLVMPPKPAESTAEWYNIDFSLQNQLRAGAPYTVAAAAAAGSGPKD
PLARKMRLRRRKDSAQDDQAKQVLKGMSDVAQEKNKKQEESLDTRAPGGKVRRWDQGLEK
PRLDYSEFFTEDVGQLPGLVIWQIENFVPVLVEEAFHGKFYEADCYIVLKTFLDDSGSLN
WEIYYWIGGEATLDKKACSAIHAVNLRNYLGAECRTVREEMGDESEEFLQVFDHDISYIE
GGTASGFYTVEDTHYVTRMYRVYGKKNIKLEPVPLKGASLDPRFVFLLDQGLDIYVWRGG
QATLSCTTKARLFAEKINKNERKGKAEITLLVQGQEPPEFWEVLGGEPSEIKKHVPDDFW
PPQPKLYKVGLGLGYLELPQINYKLSVEHKKRPKVELMPRMRLLQSLLDTRCVYILDCWS
DVFIWLGRKSPRLVRAAALKLGQELCGMLHRPRHAAVSRSLEGTEAQVFKAKFKNWDDVL
TVDYTRNAEAVLQGPGLSGKVKRDTEKKDQMKADLTALFLPRQPPMPLAEAEQLMEEWNE
DLDGMEGFVLEGKKFARLPEEEFGHFYTQDCYVFLCRYWIPAECEEDEKKEHKDEGKTDK
EGKEGEEAATETEDKQPEEDFQCIVYFWQGREASNMGWLTFTFSLQKKFESLFPGKLEVV
RMTQQQENPKFLSHFKRKFIIHRGRRKMAHSVQQPSLYQIRTNGSALCTRCIQINTDSSL
LNSEFCFILKVPFESEDNQGIVYAWVGRASDPDEAKLAEDILNTMFDASYSKQVINEGEE
PENFFWVGIGVQKPYDDDAEYMKHTRLFRCSNEKGYFAVTEKCSDFCQDDLADDDIMLLD
NGQEVYMWVGTQTSQVEIKLSLKACQVYIQHMRSKEHEQPRRLRLVRKGNEQHAFTRCFH
AWSAFRQALA
Download sequence
Identical sequences ENSDORP00000004997 ENSDORP00000004997

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]