SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000007288 from Dipodomys ordii 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000007288
Domain Number 1 Region: 198-279
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000111
Family I set domains 0.018
Further Details:      
 
Domain Number 2 Region: 299-376
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000000102
Family I set domains 0.015
Further Details:      
 
Domain Number 3 Region: 80-158
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000133
Family I set domains 0.041
Further Details:      
 
Domain Number 4 Region: 13-62
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000177
Family V set domains (antibody variable domain-like) 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000007288   Gene: ENSDORG00000007774   Transcript: ENSDORT00000007774
Sequence length 622
Comment pep:novel genescaffold:dipOrd1:GeneScaffold_6905:1880:6386:-1 gene:ENSDORG00000007774 transcript:ENSDORT00000007774 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GTNTVTGEPVASTNPARPTQAWTQGRFQLLGDPHRNNCTLSIRDARKEDQRTYFFRVEKG
EKLKYNFHGDKFRLEVAARTQPHIFIPETLEPGQAVTIICMVPCISQQCVAPSISWSGPA
LSSTESRPQTSFLSAISLTPRLRDHGTQLTCRVNFRAGNTVENSVRLSVACAPRDLVITI
LRDNAQALESKGNMTCMDVLKGQFLRLLCTAAGRPPPTLTWVLGNRVLLRSNATHPGALM
LDLPGVKIRDAGRYTCHGENRLGSLHRSLDLSVQYPPEALTVTASQGNSTELEIHRNGSS
LHVLQGQSLRLVCVTRSHPPATLSWARGSQILSAPWPAEPGVLELPVVEAEHEGEFTCQV
QNPLGDLHISLSLSVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
LIQNLKTKPSSPPRTASPGTVSPEPRKNQKPPSCPKPTSPTQGPDPQSCPEELHYAALNF
PGIESPRPRDPEEKYTEIHFHR
Download sequence
Identical sequences ENSDORP00000007288 ENSDORP00000007288

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]