SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000007886 from Dipodomys ordii 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000007886
Domain Number 1 Region: 1-162
Classification Level Classification E-value
Superfamily RUN domain-like 3.14e-38
Family RUN domain 0.00084
Further Details:      
 
Domain Number 2 Region: 498-611
Classification Level Classification E-value
Superfamily PH domain-like 5.29e-17
Family Pleckstrin-homology domain (PH domain) 0.0092
Further Details:      
 
Domain Number 3 Region: 654-755
Classification Level Classification E-value
Superfamily PH domain-like 0.000000315
Family Pleckstrin-homology domain (PH domain) 0.014
Further Details:      
 
Weak hits

Sequence:  ENSDORP00000007886
Domain Number - Region: 960-1018
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0935
Family PHD domain 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000007886   Gene: ENSDORG00000008403   Transcript: ENSDORT00000008402
Sequence length 1024
Comment pep:known_by_projection scaffold:dipOrd1:scaffold_7943:3:33833:1 gene:ENSDORG00000008403 transcript:ENSDORT00000008402 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
VKALQKQYVSLDTVVTSEDSDANIMCSALEAVFIHGLHAKHIRAEAGGKRKKQVHQKPLP
QPVFWPLLKAVTHKHIISELEHLVFVNTDVGRCRAWLRLALNDGLMECYLKLLLQEQAQL
CEYYQPTALLRDAEEGEFLLSFLQGLTSLSFELSYKSAILNEWTLTPLALSGLCPLTELE
PLSTSGAELQQKESLDSISHSSGSEDIEVHHSGHKIQRNRELTASSLSLDTASSSQLSCS
LNSDSCLLQESGSKSPDRSEEPMSYDSDLGTANVDDSDPSLQEVLSEFSKAQVNSVPSNR
PNQETETLKPQSSLSLSATNTQLHFDGPAELLPASASSTTQHGGHKQEPLPQEPGALDVQ
QPAGSLSDQQSSSPVSATVGPVCGQQKVPDRGRIGLKLGVSSPTSPKSPSWISEDDXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXLSNPFRGLMKLGTVARRGAMGIWKEFFCELSPLELRLYLSDEE
HTCVESCSLLRCQAVGPAHSDGRFELVFSGKKLALRASSQDEAEDWLDRVREALQKVQPQ
QEDEWVNIQYPEEPEDAPEGPPGSHPSHSALLAEPVVPQGTQLNWTSAQVPEPDAIKESL
LYLYADRTWIPYIFSLSLESLKCFRVRNNEKMLSDSHGVETIRDILPDTSLGGPAFFKII
TAKAILKLQAGTAEEAALWRDLVRKVLASYLETAEEAVTLGGSLDENCQEVLKFATRENG
LLQYVAIPTEKGLDQGCFCAGCSQQIGFSFVRPKLCAFSGLYYCDICHQDDASVIPARII
HNWDLTKRPVCRQALKFLAQIQTQPLINLQLVNASLYEHVERMHLIGRSREQLKLLGDYL
GLCRSSALKELSKRLNHRNYLLESPHKFSVTDLQQIAEGVYEGFLKALIEFASQHVYHCN
LCTQRGFICQICHHHDIIFPFEFDTTVRCAECKTVFHQSCQAVMRKGCPRCARRRKYQEQ
NILT
Download sequence
Identical sequences ENSDORP00000007886 ENSDORP00000007886

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]