SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000008074 from Dipodomys ordii 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000008074
Domain Number 1 Region: 268-504
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.36e-65
Family Nuclear receptor ligand-binding domain 0.00000000142
Further Details:      
 
Domain Number 2 Region: 70-94
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000357
Family Nuclear receptor 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000008074   Gene: ENSDORG00000008602   Transcript: ENSDORT00000008602
Sequence length 513
Comment pep:known_by_projection genescaffold:dipOrd1:GeneScaffold_6562:13753:197137:1 gene:ENSDORG00000008602 transcript:ENSDORT00000008602 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RRPPPQPPRSGGLRPPAWLSPRRGSASPTTTASSPRAERDFGAVRGSGGEQLHDYEERGS
GHTMRAQIEVIPCKICGDKSSGIHYGVITCEGCKXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEA
LTRVYSGSSHSGETGGAYANGHAIDLPKSEYYNVDSGQPSPDQSGLDITGIKQIKQEPIY
DLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTY
EEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVL
VRMCRAFNPNNTVLFEGKYGGMQMFALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAV
LISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEK
LQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
Download sequence
Identical sequences ENSDORP00000008074 ENSDORP00000008074

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]