Domain assignment for ENSDORP00000012178 from Dipodomys ordii 76_1

Domain assignment details

Strong hits

Sequence: ENSDORP00000012178

• Domain Number 1, Region: 418-675
  • Superfamily: YWTD domain (E-value 1.27e-48)
  • Family: YWTD domain (E-value 0.000000106)
• Domain Number 2, Region: 206-245
  • Superfamily: LDL receptor-like module (E-value 0.00000000000262)
  • Family: LDL receptor-like module (E-value 0.0005)
• Domain Number 3, Region: 4-40
  • Superfamily: LDL receptor-like module (E-value 0.00000000000484)
  • Family: LDL receptor-like module (E-value 0.00082)
• Domain Number 4, Region: 244-284
  • Superfamily: LDL receptor-like module (E-value 0.0000000000406)
  • Family: LDL receptor-like module (E-value 0.00049)
• Domain Number 5, Region: 125-162
  • Superfamily: LDL receptor-like module (E-value 0.000000000127)
  • Family: LDL receptor-like module (E-value 0.001)
• Domain Number 6, Region: 42-80
  • Superfamily: LDL receptor-like module (E-value 0.000000000406)
  • Family: LDL receptor-like module (E-value 0.00053)
• Domain Number 7, Region: 159-197
  • Superfamily: LDL receptor-like module (E-value 0.00000000119)
  • Family: LDL receptor-like module (E-value 0.00096)
• Domain Number 8, Region: 79-121
  • Superfamily: LDL receptor-like module (E-value 0.00000000196)
  • Family: LDL receptor-like module (E-value 0.00017)
• Domain Number 9, Region: 371-411
  • Superfamily: EGF/Laminin (E-value 0.00000000729)
  • Family: EGF-type module (E-value 0.0012)
• Domain Number 10, Region: 335-378
  • Superfamily: EGF/Laminin (E-value 0.0000000201)
  • Family: EGF-type module (E-value 0.0054)
• Domain Number 11, Region: 290-326
  • Superfamily: LDL receptor-like module (E-value 0.0000000681)
  • Family: LDL receptor-like module (E-value 0.00039)

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Protein sequence

• External link(s): Protein: ENSDORP00000012178 Gene: ENSDORG00000012954 Transcript: ENSDORT00000012954
• Sequence length: 844
• Comment: pep:known_by_projection scaffold:dipOrd1:scaffold_3319:47561:65348:1 gene:ENSDORG00000012954 transcript:ENSDORT00000012954 gene_biotype:protein_coding transcript_biotype:protein_coding
• Sequence:

  RKAKCDPSQFQCTNGRCITLLWKCDGDEDCTDGSDERNCVKKTCAESDFVCNNGQCVPNR
  WQCDGDPDCEDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDSGEDEEN
  CGNITCNPLEFTCSSGRCISKNFVCNGQDDCNDGSDEFDCAPPTCGAHEFQCSTSSCIPI
  SWVCDDDADCSDQSDESLEQCGRQPVIHTKCPASEIQCGSGECIHKKWRCDGDPDCKDGS
  DEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRS
  GECIDILKVCNQEQDCRDWSDEPLKECXXXTSMECSINNGGCSHICKDLVIDYECDCAAG
  FELIDRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPSLIF
  TNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRH
  VKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKYLFNSDLREPASIAVDP
  LSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTLDIQWPNGITLDLIKSRLYWLDSKLHMLS
  SVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNL
  NDAQDIIVYHELVQPSGKNCEDDENGGCEYLCLPAPQIDHSPXXXXXXXXXXXXXXXXXX
  XXXXXXXXXYGETKDNTTEIPATSGLVPGGINVTTAVSEVSVPPKGSSAAWAILPLLLLV
  MAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVSTD
  DDLA

• Identical sequences: ENSDORP00000012178 ENSDORP00000012178