SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSDORP00000010475 from Dipodomys ordii 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSDORP00000010475
Domain Number 1 Region: 386-647
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.62e-56
Family Nuclear receptor ligand-binding domain 0.000000018
Further Details:      
 
Domain Number 2 Region: 314-391
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 8.36e-28
Family Nuclear receptor 0.0000152
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000010475   Gene: ENSDORG00000011146   Transcript: ENSDORT00000011146
Sequence length 649
Comment pep:known_by_projection genescaffold:dipOrd1:GeneScaffold_2173:35765:74716:1 gene:ENSDORG00000011146 transcript:ENSDORT00000011146 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
PHDSIRFGNVDMPCVQAQYSPSPPGYSYAVQTYGSEYTAEIMNPDYDKLTMNLSSTEITA
TATTSLPSFSTFMEGSSYELKPSCLYQMQPSGPRSLIKMEEGRAHGYHHHHHHHHHHHHH
HQQQQQQPSIPPPPSGPEDEVLPSTSMYFKQSPPSTPTTQGFPPQAGALWDDTLPSAPGC
LAPGPLLDPQMKAVPSVAGARFPLFHFKPSSSPHPPAHSPAAAAAGGHHLGYDPTAAAAL
SLPLGAAAAAAAAAGSQAAALEGHPYGLPLAKRPATLAFSPLGLTTSPTASSLLGESPSL
PSPPNRSSSSGKGTCAVCGDNAACPHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVD
KRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPSPPSPPIC
MMNALVRALTDSTPRDLDYSRYCPTDQASTGTDAEHVQQFYNLLTASIDVSRSWAEKIPG
FTDLPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCLRGFGEWLDSI
KDFSLNLQSLNLDIQALACLSALSMITERHGLKEPKRVEELCNKITSSLKDHQSKGQALE
PTEPKVLRVLVELRKICTQGLQRIFYLKLEDLVSPPSVIDKLFLDTLPF
Download sequence
Identical sequences ENSDORP00000010475 ENSDORP00000010475

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