SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000011979 from Dipodomys ordii 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000011979
Domain Number 1 Region: 293-339
Classification Level Classification E-value
Superfamily LEM domain 0.0000000000235
Family LEM domain 0.0054
Further Details:      
 
Weak hits

Sequence:  ENSDORP00000011979
Domain Number - Region: 11-70
Classification Level Classification E-value
Superfamily Ankyrin repeat 0.00114
Family Ankyrin repeat 0.0056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000011979   Gene: ENSDORG00000012737   Transcript: ENSDORT00000012737
Sequence length 550
Comment pep:known_by_projection genescaffold:dipOrd1:GeneScaffold_4409:267:7695:1 gene:ENSDORG00000012737 transcript:ENSDORT00000012737 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDAATRLALRLRAAVREEEPRAVEELLRRGANPNLVLADGVAAVHLAAGARRARGLRCRG
ALLRGGRDPDTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPDYSPVRCGCSSDASSFTAGEDPDQD
RTARGVGSMTQTSQGALGVPPPGHRLCRSQGQETELGAHLQALTLTSPEDAAGQPPLCSP
ALPDGSPVHSPPQGPACLPFQTSFDNDVAALWLTEDEEGASGAGDSVLSFQSQPVSAMSD
LELLRALLALGTSPGPITPFTRPHYLRRLEEAYAASGPEFSGHSPELAEALRTGCVPDSQ
ADEDCLAQQFGRPNPTKRWREGTAKSSFIYLLLDPRETQDLPARAFSLTPAERLQTFVRA
IFYVGKGTRTRPDVHLREALGYRGQPRKQPACPKVRQILDIWDSGRGVVSLHCFQHVVAV
EAYTREACLLDALGIQRLTNQKQGHYYGVVASWPPSRRRRLGVHLLHRALLVFLAEGERE
LRPLDIQAYG
Download sequence
Identical sequences ENSDORP00000011979 ENSDORP00000011979

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]