SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMICP00000001356 from Microcebus murinus 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMICP00000001356
Domain Number 1 Region: 81-158
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 1.33e-16
Family P4 origin-binding domain-like 0.0088
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMICP00000001356   Gene: ENSMICG00000001487   Transcript: ENSMICT00000001486
Sequence length 1146
Comment pep:known_by_projection scaffold:micMur1:scaffold_13921:27347:39702:1 gene:ENSMICG00000001487 transcript:ENSMICT00000001486 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSEIRPQAIEQVQTQTHVASAPASRAV
VAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTS
TGFYKCLRTVFPNHTVKRVEDSSNSGQAHIHVVGVKRRAIPLPIQMYYQQQPVSTPVVRV
DSVPDVSPTPSPAGIPHGPQTVGNHFQRTPVTNQSSNLTATQMSFPVQGVHTVAQTVSRI
PPNPSVHTHQQQNAPVTVIQNKAPIPCEVVKATVIQNSMPQTAVPVSIAVGGGPTQSSVV
PNHSTGPQPVTVVNSQTLLHHPSVIPQQSSLHTVVPGQIPSGTPVTVIQQAVPQSHIFGR
VQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSASSQPQDTVIIAPPQYVTTSASNIVSA
TSVQNFQVAAGQMVTIAGVPSPQPSRVGFQNIAPKPLPSQQVSSTVVQQPIQQPQQPTQQ
SVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTVQLTGQPNITPSSSPSPAPANQVPT
AISSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPAPPPQQVQVQVQQPQQVQMQVQPQQTN
AGVGQSASGESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVANNQA
AGFGVQGQTPAQPLLVGQQNVQLVQSAIPPTGGVQTMPISNLQILPGPLISNSPATIFQG
TSGNQVTITVVPNTSFATATVSQGNTTQLIAPAGITMSGTQTGVGLHVQALPATQVSPAG
QSSCTTATLPFKGDKIICQKEEEAKEATGLHVHERKIEVMENPSCRRGSTNTSNGDTKEN
EMQVGSLLNGRKYSDSSLPPSNSGKIQSEANQCSLISNGPSLELGENGASGKQNSEQMDL
QDIKSDLKKPLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPVEPQGTLDVTQQDT
AKGDQLERISNGPVLTLGGSSSVSSIQEVSNVATQQFSGTDLPNGPLASSLNSDVPQQRP
SVVVSPHSTTSVIQGHQIIAVPHSGSRVSHSPALSSDVRSTNGTAECKTVKRPAEDNDRE
TVTGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAIESAVQQKQQLPPTYI
QNVVPQ
Download sequence
Identical sequences ENSMICP00000001356 ENSMICP00000001356

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]