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  Home > Genomes > Microcebus murinus 76_1 > ENSMICP00000006375

Domain assignment for ENSMICP00000006375 from Microcebus murinus 76_1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSMICP00000006375
Domain Number 1 Region: 1387-1644
Classification Level Classification E-value
Superfamily YWTD domain 4.05e-57
Family YWTD domain 0.00000311
Further Details:      
 
Domain Number 2 Region: 782-1032
Classification Level Classification E-value
Superfamily YWTD domain 3.79e-52
Family YWTD domain 0.00000215
Further Details:      
 
Domain Number 3 Region: 1083-1336
Classification Level Classification E-value
Superfamily YWTD domain 1.96e-48
Family YWTD domain 0.0000031
Further Details:      
 
Domain Number 4 Region: 480-647,679-736
Classification Level Classification E-value
Superfamily YWTD domain 2.35e-42
Family YWTD domain 0.00000828
Further Details:      
 
Domain Number 5 Region: 303-343
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000511
Family LDL receptor-like module 0.00065
Further Details:      
 
Domain Number 6 Region: 266-305
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000111
Family LDL receptor-like module 0.00082
Further Details:      
 
Domain Number 7 Region: 397-440
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000327
Family EGF-type module 0.013
Further Details:      
 
Domain Number 8 Region: 183-223
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000367
Family LDL receptor-like module 0.00062
Further Details:      
 
Domain Number 9 Region: 108-146
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000537
Family LDL receptor-like module 0.00078
Further Details:      
 
Domain Number 10 Region: 348-384
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000641
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 11 Region: 1341-1386
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000145
Family EGF-type module 0.0088
Further Details:      
 
Domain Number 12 Region: 148-182
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000055
Family LDL receptor-like module 0.00091
Further Details:      
 
Domain Number 13 Region: 738-775,1027-1078
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000612
Family Growth factor receptor domain 0.017
Further Details:      
 
Domain Number 14 Region: 427-473
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000067
Family EGF-type module 0.0046
Further Details:      
 
Domain Number 15 Region: 66-108
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000017
Family LDL receptor-like module 0.001
Further Details:      
 
Weak hits

Sequence:  ENSMICP00000006375
Domain Number - Region: 1644-1682
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000289
Family EGF-type module 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMICP00000006375   Gene: ENSMICG00000006982   Transcript: ENSMICT00000007000
Sequence length 1935
Comment pep:known_by_projection genescaffold:micMur1:GeneScaffold_2842:680896:727586:-1 gene:ENSMICG00000006982 transcript:ENSMICT00000007000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MRRLWGALLLGALLCAHAVALRLRARGEGTRNSPQLSGLRRGSGGGAHPGSGLGRSGSLA
SSPECACGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDN
GKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFPCQNGYCIRSLWHCDGDNDCGDNSD
EQCDMRKCSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLEEQCAYG
RCIXXXXXXXXXXXXXXXXXXXXXXSHQPCRSGEFMCDSGLCINAGWRCDGDADCDDQSD
ERNCTTSMCTAEQFRCRSGRCVRLSWRCDGEDDCADNSDEENCENTGSPQCASDQFLCWN
GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCH
TGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGTFQCWCETGYELRPDRRSCKALGPEPV
LLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN
VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIAL
HPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKL
HFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSGQNYTCACPTGFRKINSHACAQSLD
KFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAK
WDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRP
RDIVVEPMGGYMYWTDWGASPKIERAGMDASERQVIISSNLTWPNGLAIDYGSQRLYWAD
AGMKTIEFAGLVLIGSQLPHPFGLTLYGERIYWTDWQTKSIQSADRLTGLDRETLQENLE
NLMDIHVFHRRRPPVSTPCVVENGGCSHLCLRSPNPSGFSCTCPTGINLLPDGKTCSPGM
NSFLIFARRIDVRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISR
ANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLD
SPRAIVLYHEMGFMYWTDWGENAKLERSGMDGSERTVLINNNLGWPNGLTVDKASSQLLW
ADAHTERIEAADLNGANRHTLVSPVQHPYGLTLLDSYIYWTDWQTRSIHRADKGTGSNVI
LVRSNLPGLMDIQAVDRSQPGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTC
DPSPETYLLFSSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVYYTDVFLDV
IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINN
SLDEPRAIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRR
IYWVDAHLDRIESADLNGKLRQVLVSHVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGR
NKETVLANVEGLMDIIVVSPQRQTGTNACGVNNGGCTHLCFARALDFVCACPDEPDGRPC
FLVPGLVPPDPRATSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSERDARLGLCA
HSNEAVPAAPGEGLHISYAIGGLLSILLILVVIAALMLYRHKKSKFTDPGMGNLTYSNPS
YRTSTQEVKIEAIPKPAMYNQLCYKKEGGPDHNYTKEKIIVEGICLLSGDDAEWDDLKQL
RSSRGGLLDHVCMKTDTVSIQDSSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXHERKLSSESQV
Download sequence
Identical sequences ENSMICP00000006375 ENSMICP00000006375

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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