SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|MicpuC3|152636|e_gw1.3.108.1 from Micromonas pusilla CCMP1545 v3.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|MicpuC3|152636|e_gw1.3.108.1
Domain Number 1 Region: 15-336
Classification Level Classification E-value
Superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase 9.55e-43
Family Oligoxyloglucan reducing end-specific cellobiohydrolase 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|MicpuC3|152636|e_gw1.3.108.1
Sequence length 340
Sequence
MPSGPARAEEVSKFWEQVDLPLEPGIILLDIAFEEGDPNHGFLLGTRQTILETFDGGKTW
DFKAITAAFDEDVNYRFNSITFKGKEGWIVGKPAILLHTIDGGANWERIGLSPRLPGAPV
LITAVSDNGVAELVTDEGAIYLTTDTARNWKAAVEETISATLNRTVSSGVQGASYYTGTL
STIARNPDGEYLGLSSRGNFYMTWTPGQAYWQPHNRSSGRRVQSMGWRPDGGIWELTRGG
GIYFSNTASLPEEDDDFSEGRIGSRGFGLLDLSYTPDGKQFWIVGGSGSVFVSNDAGKSW
KRDRGTDNVAANLYRVRFQSNKQGFVLGNDGILLRFTGAK
Download sequence
Identical sequences C1MMU8
jgi|MicpuC3|152636|e_gw1.3.108.1 XP_003057467.1.6386

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]