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Domain assignment for ENSCINP00000033213 from Ciona intestinalis 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCINP00000033213
Domain Number 1 Region: 5-313
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.14e-59
Family WD40-repeat 0.00032
Further Details:      
 
Domain Number 2 Region: 394-474
Classification Level Classification E-value
Superfamily RING/U-box 2.38e-23
Family U-box 0.001
Further Details:      
 
Domain Number 3 Region: 326-395
Classification Level Classification E-value
Superfamily SAM/Pointed domain 3.57e-18
Family SAM (sterile alpha motif) domain 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCINP00000033213   Gene: ENSCING00000007025   Transcript: ENSCINT00000033508
Sequence length 477
Comment pep:known chromosome:KH:7:2618102:2626273:-1 gene:ENSCING00000007025 transcript:ENSCINT00000033508 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
SMLSICRLGGHTKEVNSCTFSTQYFVTCSGDKTLRVYSATTFTELPYSPIKIFKYGVNFV
KFDKSGSLLASACSDGKAHLFQLSETDYQVVAVFRHSDVNTAQVCAFSSQSNLLVTGSAD
GSIALWDINSKKQVRIKAGHPEGNVYAAAFTPCDHFLLTGSALGDIRMWNMQQKQAHDEG
ISSCGVTCIVFSPTFHQSHNPDRSYLVASSGQDNNVKMWIFNYACKLPRSLQLFQTLSGH
GGPVNSCDFSLDGSNIASVSFDKTVRIWASISGETEMVLDGHSTIVTSVSYSRDGKYLAT
TGYDKVTTVWKIQGETTSNSCVSPNRAAVSNWSCDEVGEWLTNEMKLEQYVEAFKNNDID
GAELESLTSEILQKELGITPLGHRNKIIRAIKALQGENISFSETAPDEYLCPISREIMTD
PVLAADGFTYERASIEKWFAKGSKLSPMTNKALVNRNLFPNQTVKSLIAQFIESKTT
Download sequence
Identical sequences H2XU79
ENSCINP00000033213

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