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Domain assignment for SPCC188_06c.1 from Schizosaccharomyces pombe 972h-

Domain architecture


Domain assignment details

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Strong hits

Sequence:  SPCC188_06c.1
Domain Number 1 Region: 43-352
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.12e-48
Family Nitrogenase iron protein-like 0.00000859
Further Details:      
 
Domain Number 2 Region: 325-430
Classification Level Classification E-value
Superfamily Signal peptide-binding domain 3.43e-29
Family Signal peptide-binding domain 0.0000848
Further Details:      
 
Weak hits

Sequence:  SPCC188_06c.1
Domain Number - Region: 12-65
Classification Level Classification E-value
Superfamily Domain of the SRP/SRP receptor G-proteins 0.0973
Family Domain of the SRP/SRP receptor G-proteins 0.00075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SPCC188_06c.1
Sequence length 522
Comment | SPCC188_06c | Schizosaccharomyces pombe 972h- signal recognition particle subunit Srp54 (523 aa)
Sequence
MVFADLGRRLNSALGDFSKATSVNEELVDTLLKNICTALLETDVNVRLVQELRSNIKKKI
NVSTLPQGINGKRIVQKAVFDELCSLVDPKVDAFTPKKGRPSVIMMVGLQGSGKTTTCSK
LALHYQRRGLKSCLVAADTFRAGAFDQLKQNAIKARVPYFGSYTETDPVVIAKEGVDKFK
NDRFDVIIVDTSGRHQQEQELFAEMVEISDAIRPDQTIMILDASIGQAAESQSKAFKETA
DFGAVIITKLDGHAKGGGALSAVAATKTPIVFIGTGEHINDLERFSPRSFISKLLGLGDL
EGLMEHVQSLDFDKKNMVKNLEQGKFTVRDFRDQLGNIMKLGPLSKMASMIPGMSNMMNG
MNDEEGSLRMKRMLYIVDSMTEQELDSDGLLFVEQPSRVLRVARGSGTSVLEVEETISQV
RVFAQMAKKIGGKDGILGKLGGNPAAALKKDPRQLAAMQKRMQAMGMGGGMPGLNPGSMN
FGDISKMANMLMGGGGPGGAGGMDFSGMLNQFQNMQKPPRRR
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Identical sequences P21565
NP_588209.1.19918 SPCC188.06c___KOG0780 SPCC188_06c.1 4896.SPCC188.06c-1 SPCC188.06c

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