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Domain assignment for gi|15669699|ref|NP_248512.1| from Methanocaldococcus jannaschii DSM 2661

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|15669699|ref|NP_248512.1|
Domain Number 1 Region: 57-188,335-471
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.88e-53
Family Tandem AAA-ATPase domain 0.0000426
Further Details:      
 
Domain Number 2 Region: 573-693
Classification Level Classification E-value
Superfamily Restriction endonuclease-like 6.7e-30
Family XPF/Rad1/Mus81 nuclease 0.000048
Further Details:      
 
Domain Number 3 Region: 706-774
Classification Level Classification E-value
Superfamily RuvA domain 2-like 0.0000000000000445
Family Hef domain-like 0.0022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|15669699|ref|NP_248512.1|
Sequence length 778
Comment Hef nuclease [Methanocaldococcus jannaschii DSM 2661]
Sequence
MFIEHPLIKPKTLEARLYQQIIAANALKKKTLCVLSTGLGKTAIAILVIAGILTKKDGKV
LILAPSRPLVEQHYNRLKQVLNIDEDKIIALTGKIQPKKRAELYKKGKIFIATPQVIEND
IIAGRINVDEFILLIADEAHHTTGDHAYAFVAKKFKDKCHILGLTASPGSDIDKVMEICE
NLGIEHVEVRTEDDEDVKPYIAKVKLIPIRIDLPNEFKRALKLINEALKERLKILKDAGV
INSIADVTKTELIELNNKLFSYDEEVKYELIKVCSEALKLMHAKELLESQGKSVFLNYIN
KLSMQRTKSAKSIVNDEKVREAVNLLMKSDVEHPKLGKVVDMVKNILEKNKDERIIIFAQ
YRDTVEKIVNLLTQNGIKAIRFIGQANKEGKGMSQKEQIEAIERFKKEGSVLVSTSVSEE
GIDIPSVNYIIFYEPVPSEIRFIQRRGRAMRGEGGKVYVLIAKGTADEAYYRSALYKERE
MKRLLKNMCYLLNKRLQKKFEEKSKEEIKEETEEIKEKEIESKTAVKEETKEEEEKTKKP
VTILDFIKQIEVKERSKSEEDKIKQEIKIPKKPIKIIVDVREKNMAKLLHNYANIELKTL
EVGDYVLSDRVVVERKTAEDFVNSIIDKRLFSQLKNLKKVEKPLLIVEGENFSRLHENAL
KGAILSIILDFGIPIIFTKNAEETADLLIKIAEKEQIKEKRTVMVRYGKTAMSLKEQQKF
IVESLPDVGGALAERLLKHFKTVENVFTAKEEELMKVEGVGKERAKKIREVLTAEYEG
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Identical sequences Q58900
243232.MJ1505 WP_010871028.1.84152 gi|15669699|ref|NP_248512.1| IGBMC-0122-000

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