SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|332796515|ref|YP_004458015.1| from Acidianus hospitalis W1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|332796515|ref|YP_004458015.1|
Domain Number 1 Region: 8-180
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 6.58e-45
Family Ribonuclease PH domain 1-like 0.000000536
Further Details:      
 
Domain Number 2 Region: 153-240
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 5.5e-24
Family Ribonuclease PH domain 2-like 0.0000119
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|332796515|ref|YP_004458015.1|
Sequence length 243
Comment exosome complex exonuclease 1 [Acidianus hospitalis W1]
Sequence
MLQIQKPKLILDNGLRLDGRRPDELRPMKMEVGVLKNADGSAIVEVGNTKILAAVYGPRE
MHPRHLALPNRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESQILVEQFPRT
SIDVFMEVLQADAGTRLASLMAASLAVVDAGIPVRDLIAAVAVGKADGVVVLDLNEPEDM
WGEADMPVAMMPSIGQINLLQLNGNMTPEEFRQGMELAMKGINIIYNLEKETLKNKYAEL
KEE
Download sequence
Identical sequences F4B8B8
WP_013775633.1.74519 gi|332796515|ref|YP_004458015.1| 2014255378

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]