SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|332796516|ref|YP_004458016.1| from Acidianus hospitalis W1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|332796516|ref|YP_004458016.1|
Domain Number 1 Region: 11-176,205-218
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 6.07e-56
Family Ribonuclease PH domain 1-like 0.000000274
Further Details:      
 
Domain Number 2 Region: 191-273
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 9.96e-19
Family Ribonuclease PH domain 2-like 0.0000507
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|332796516|ref|YP_004458016.1|
Sequence length 276
Comment 3' exoribonuclease [Acidianus hospitalis W1]
Sequence
MSITPSNENIVPLIKRESILASLDRGIRADGRKFNEYRPLSITLSYAKKADGSALVKLGD
TTVLAGVKVEPEEPFEDTPNQGNLVVNVELLPLAYETFEPGPPDENAIELSRVVDRSLRD
SKSIDLSKLVIEPGKKIWTVWVDIYVLDYGGNILDACTLAAVSALYDTRLPKVVKEGDEI
KIIKEEKGEKLPMNFPVVTVSVAKIGKHLVVDPDLDEEGIMDAKISLSYTPEGRIVGIQK
TGIGTFTLTEIDNVETLARSVSQKLLEELKKQINIQ
Download sequence
Identical sequences F4B8B9
gi|332796516|ref|YP_004458016.1| WP_013775634.1.74519

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]