SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLAFP00000002214 from Loxodonta africana 69_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLAFP00000002214
Domain Number 1 Region: 954-1167
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.54e-107
Family Thrombospondin C-terminal domain 0.00000000118
Further Details:      
 
Domain Number 2 Region: 29-233
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.67e-39
Family Laminin G-like module 0.00000000676
Further Details:      
 
Domain Number 3 Region: 831-952
Classification Level Classification E-value
Superfamily TSP type-3 repeat 8.76e-36
Family TSP type-3 repeat 0.000000182
Further Details:      
 
Domain Number 4 Region: 490-542
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 2.75e-17
Family TSP-1 type 1 repeat 0.0000239
Further Details:      
 
Domain Number 5 Region: 434-483
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 6.02e-16
Family TSP-1 type 1 repeat 0.0000399
Further Details:      
 
Domain Number 6 Region: 763-833
Classification Level Classification E-value
Superfamily TSP type-3 repeat 0.0000000000000772
Family TSP type-3 repeat 0.00022
Further Details:      
 
Domain Number 7 Region: 315-373
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000282
Family VWC domain 0.0079
Further Details:      
 
Domain Number 8 Region: 690-774
Classification Level Classification E-value
Superfamily TSP type-3 repeat 0.00000000000379
Family TSP type-3 repeat 0.00014
Further Details:      
 
Domain Number 9 Region: 378-427
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000327
Family TSP-1 type 1 repeat 0.00067
Further Details:      
 
Domain Number 10 Region: 546-600
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000089
Family EGF-type module 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000002214   Gene: ENSLAFG00000002650   Transcript: ENSLAFT00000002650
Sequence length 1169
Comment pep:novel supercontig:loxAfr3:scaffold_64:9131954:9145116:1 gene:ENSLAFG00000002650 transcript:ENSLAFT00000002650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGLAWGLGVLLLLQVCGTNRIPESGGDNSVFDIFELTGGSRKGSGRRLVRGPDPSSSAFR
IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLALERKDHSGQVFSVV
SNGKAGTLDLSLTVQGKQHVVSVEDVLLATGQWKSITLFVQEDRAQLYIDCEKMENAELE
VPIQSIFTRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTNVLL
ALDNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSNMVLELRGLRTIVTTLQDSIRKV
TEENKELANELRRSPLCYHNGVQYRNNEEWTVDSCTECRCQNSVTICKKVSCPIMPCSNA
TVPDGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQTR
TCHIQECDKRFKQDGSWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQLNGKPCEGEARET
KACKKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCIGDVTENQIC
NKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPAGYSGNGVQCTDVDECKEVPDACFN
HNGEHRCKNTDPGYNCLPCPPRFTGTQPFGQGIEHATANKQVCKPRNPCTDGTHDCNKNA
KCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPNL
PNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYNH
NPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEHN
PDQLDSDSDRIGDTCDSNQDIDEDGHQNNLDNCPYVPNANQADHDKDGVGDACDHDDDND
GIPDDRDNCRLVSNPDQKDSDGDGRGDACKDDFDQDSVPDIDDICPENVDISETDFRRFQ
MIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAIGYDEFNAVDFSGTFFINTERDDD
YAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNALW
HTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYDK
TYAGGRLGLFVFSQEMVFFSDLKYECRGR
Download sequence
Identical sequences G3SQW2
ENSLAFP00000002214 ENSLAFP00000002214

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]