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Domain assignment for ENSLAFP00000004089 from Loxodonta africana 69_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLAFP00000004089
Domain Number 1 Region: 351-499,541-699
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.45e-47
Family WD40-repeat 0.0035
Further Details:      
 
Domain Number 2 Region: 230-409
Classification Level Classification E-value
Superfamily NHL repeat 4.97e-19
Family NHL repeat 0.029
Further Details:      
 
Domain Number 3 Region: 720-818
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.00000054
Family WD40-repeat 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000004089   Gene: ENSLAFG00000004885   Transcript: ENSLAFT00000004886
Sequence length 822
Comment pep:novel supercontig:loxAfr3:scaffold_9:76676183:76765445:-1 gene:ENSLAFG00000004885 transcript:ENSLAFT00000004886 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LEDLFKFYYGTFQTHLALSLSLDDSASAASSMEVTDRIASLEQRVQMQEDDIQLLKSALA
DVVRRLNITEEQQAVLNRKGPTKARPLVQTLPLRTTVNNGTVLPKKPSGSLPSPSGARKE
TAVPATKSTIKRTSSSERVSPGGRRESYGDSKGNRNRTGSTSSSSSGKKNSESKPKEPVF
SSEEGYVKMFLRGRPVTMYMPKDQVDSYNLETKVELPTKRLRLEWWVYGYRGRDCRNNLY
LLPTGETVYFIASVVVLYNVDEQLQRHYAGHNDDVKCLAVHPDRITIATGQVAGTSKDGK
KKQLPPHVRIWDSVTLNTLHVIGIGFFDRAVTCIAFSKSNGGSNLCAVDDSNDHVLSVWD
WQKEERLAEVKCSNEAVFAVDFHPTDTNIIVTCGKSHLYFWTLEGSSLIKKQGLFEKQEK
PKFVLCVTFSENGDTITGDSSGNILVWGKGTNRISYAVQGAHEGGIFALCILRDGTLVSG
GGKDRKLISWNGNYQKLHKTEIPEQFGPIRTVAEGKGDVILIGTTRNFVLQGTLTGDFVP
ITQGHTDELWGLAIHASKPQFLTCGHDRRATLWDAVGHRPVWDKVIEDPAQSSGFHPSGS
VVAVGTLTGRWFVFDTETKDLVTVHTDGNEQLSVMRYSPDGNFLAIGSHDNSIYIYGVSD
NGRKYTRVGKCSGHSSFITHLDWSVNSQFLVSNSGDYEILYSMSSFPPNPPRQSVPPGRT
WDPEDESDWHSLSTHYTRVWPEGSDGTDINAVCRAHEKKLLSTGDDFGKVHLFSYPCSQF
RAPSHVYGGHSSHVTNVDFLHADSHLISTGGKDTSIMQWRVV
Download sequence
Identical sequences G3U378
ENSLAFP00000004089 ENSLAFP00000022286

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