SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLAFP00000004840 from Loxodonta africana 69_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLAFP00000004840
Domain Number 1 Region: 295-497
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.15e-48
Family SPRY domain 0.0000301
Further Details:      
 
Domain Number 2 Region: 5-89
Classification Level Classification E-value
Superfamily RING/U-box 2.65e-27
Family RING finger domain, C3HC4 0.0056
Further Details:      
 
Domain Number 3 Region: 92-152
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.0000000000000013
Family B-box zinc-binding domain 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000004840   Gene: ENSLAFG00000023177   Transcript: ENSLAFT00000005774
Sequence length 499
Comment pep:novel supercontig:loxAfr3:scaffold_255:87198:98330:-1 gene:ENSLAFG00000023177 transcript:ENSLAFT00000005774 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MASAIVVKLQEEVTCPICLELLREPLSLDCGHSFCQACITVNSKTSMVSSEGESTCPMCR
IKYQADNLRPNQHLANIVEKLREVKVSLEEKGQTGDVCERHGEKLLLFCKEDGKVICWLC
ERTEEHRGHHTFLVEEVAQKNQAKLKAALERLRMKQKKAEKLGADIREERASWKNQIETE
RQNVQAQFNQLRDILDSEEQCELQKLQKEKENIMDNLAEGENELAQESQLVEELVSDLEH
QLQASSVEMLQGVNDIIKRSETFTVKRPKTFPKKPRRTFRAPDLRDILKVFRELTDVQCY
WVDVTLNPVRASSNVVISADQRQVRVVHILNFNNSYQCDFSAFGVLGCQYFFSGKHYWEV
DVSTKTAWILGVCCRTSDPRENWGSWFRLGSNANLQDVYSRYRPQHGYWVIGLRNQFEYN
AFEDSSSLDPQVRTLFMAAPPHRVGVFLDYEAGTVSFFNVTNHGSLIYKFSQCCFSQRVS
PYFNPCNCPAPMTLCPPSS
Download sequence
Identical sequences G3TNM7
ENSLAFP00000004840 ENSLAFP00000016879

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]