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  Home > Genomes > Loxodonta africana 69_3 > ENSLAFP00000005024

Domain assignment for ENSLAFP00000005024 from Loxodonta africana 69_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSLAFP00000005024
Domain Number 1 Region: 2975-3233
Classification Level Classification E-value
Superfamily YWTD domain 1.31e-56
Family YWTD domain 0.00000152
Further Details:      
 
Domain Number 2 Region: 1216-1481
Classification Level Classification E-value
Superfamily YWTD domain 1.44e-52
Family YWTD domain 0.00000192
Further Details:      
 
Domain Number 3 Region: 3820-4091
Classification Level Classification E-value
Superfamily YWTD domain 5.62e-43
Family YWTD domain 0.00000564
Further Details:      
 
Domain Number 4 Region: 483-721
Classification Level Classification E-value
Superfamily YWTD domain 6.15e-41
Family YWTD domain 0.00000905
Further Details:      
 
Domain Number 5 Region: 1878-2098
Classification Level Classification E-value
Superfamily YWTD domain 2.62e-40
Family YWTD domain 0.0000169
Further Details:      
 
Domain Number 6 Region: 147-416
Classification Level Classification E-value
Superfamily YWTD domain 1.57e-38
Family YWTD domain 0.0000808
Further Details:      
 
Domain Number 7 Region: 1563-1785
Classification Level Classification E-value
Superfamily YWTD domain 4.45e-38
Family YWTD domain 0.0000643
Further Details:      
 
Domain Number 8 Region: 2147-2416
Classification Level Classification E-value
Superfamily YWTD domain 1.96e-34
Family YWTD domain 0.0000304
Further Details:      
 
Domain Number 9 Region: 2863-2967,3226-3287
Classification Level Classification E-value
Superfamily Growth factor receptor domain 5.49e-21
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number 10 Region: 1129-1208,1788-1832
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000029
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number 11 Region: 795-837
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000537
Family LDL receptor-like module 0.0000883
Further Details:      
 
Domain Number 12 Region: 3515-3555
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000117
Family LDL receptor-like module 0.00063
Further Details:      
 
Domain Number 13 Region: 3599-3644
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000157
Family LDL receptor-like module 0.00099
Further Details:      
 
Domain Number 14 Region: 876-915
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000017
Family LDL receptor-like module 0.00079
Further Details:      
 
Domain Number 15 Region: 3557-3593
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000223
Family LDL receptor-like module 0.00047
Further Details:      
 
Domain Number 16 Region: 3433-3473
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000034
Family LDL receptor-like module 0.00078
Further Details:      
 
Domain Number 17 Region: 2639-2676
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000038
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 18 Region: 960-997
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000393
Family LDL receptor-like module 0.0000983
Further Details:      
 
Domain Number 19 Region: 3315-3355
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000393
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 20 Region: 836-878
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000419
Family LDL receptor-like module 0.00056
Further Details:      
 
Domain Number 21 Region: 921-958
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000055
Family LDL receptor-like module 0.00087
Further Details:      
 
Domain Number 22 Region: 3477-3516
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000812
Family LDL receptor-like module 0.00083
Further Details:      
 
Domain Number 23 Region: 1004-1044
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000144
Family LDL receptor-like module 0.00012
Further Details:      
 
Domain Number 24 Region: 2679-2713
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000017
Family LDL receptor-like module 0.00089
Further Details:      
 
Domain Number 25 Region: 2506-2546
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000196
Family LDL receptor-like module 0.002
Further Details:      
 
Domain Number 26 Region: 3394-3431
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000034
Family LDL receptor-like module 0.00087
Further Details:      
 
Domain Number 27 Region: 2760-2796
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000034
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 28 Region: 2546-2585
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000628
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 29 Region: 2799-2838
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000956
Family LDL receptor-like module 0.00055
Further Details:      
 
Domain Number 30 Region: 3357-3395
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000114
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 31 Region: 3277-3312
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000114
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 32 Region: 2719-2753
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000157
Family LDL receptor-like module 0.00083
Further Details:      
 
Domain Number 33 Region: 3685-3722
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000223
Family LDL receptor-like module 0.0025
Further Details:      
 
Domain Number 34 Region: 89-136
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000235
Family EGF-type module 0.004
Further Details:      
 
Domain Number 35 Region: 2470-2507
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000183
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 36 Region: 749-794
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000251
Family EGF-type module 0.041
Further Details:      
 
Domain Number 37 Region: 17-53
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000484
Family LDL receptor-like module 0.0024
Further Details:      
 
Domain Number 38 Region: 1053-1087
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000681
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 39 Region: 1090-1125
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000123
Family LDL receptor-like module 0.0026
Further Details:      
 
Domain Number 40 Region: 2605-2635
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000013
Family LDL receptor-like module 0.0019
Further Details:      
 
Domain Number 41 Region: 1793-1833,2104-2154,2418-2470
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000173
Family Growth factor receptor domain 0.023
Further Details:      
 
Domain Number 42 Region: 3722-3808,4092-4133
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000361
Family Growth factor receptor domain 0.018
Further Details:      
 
Domain Number 43 Region: 3641-3677
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000111
Family LDL receptor-like module 0.0032
Further Details:      
 
Domain Number 44 Region: 1492-1541
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000426
Family EGF-type module 0.024
Further Details:      
 
Domain Number 45 Region: 4143-4178
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000932
Family EGF-type module 0.042
Further Details:      
 
Weak hits

Sequence:  ENSLAFP00000005024
Domain Number - Region: 4182-4216
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000541
Family EGF-type module 0.031
Further Details:      
 
Domain Number - Region: 4216-4251
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0013
Family EGF-type module 0.041
Further Details:      
 
Domain Number - Region: 4322-4359
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00215
Family EGF-type module 0.046
Further Details:      
 
Domain Number - Region: 433-469
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00239
Family EGF-type module 0.016
Further Details:      
 
Domain Number - Region: 64-97
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00614
Family EGF-type module 0.025
Further Details:      
 
Domain Number - Region: 4253-4287
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0954
Family EGF-type module 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000005024   Gene: ENSLAFG00000005976   Transcript: ENSLAFT00000005991
Sequence length 4490
Comment pep:novel supercontig:loxAfr3:scaffold_2:46460617:46535112:1 gene:ENSLAFG00000005976 transcript:ENSLAFT00000005991 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
PDGSDEAPEICPQSKVQRCQPNEHNCLGTELCVSMSRLCNGVQDCMDGSDEGSHCRELQG
NCSRLGCQHHCVPTLAGPTCYCNSSFQLQADGKTCKDFDECSVYGTCSQLCTNTDGSFTC
GCVEGYLLQPDNRSCKAKNEPVDRPPVLLIANSQNILATYLSGAQVSTITPTSTRQTTAM
DFSYANETVCWVHVGDSAAQTQLKCARMPGLKGFVDEHTINISLSLHHVEQMAIDWLTGN
FYFVDDIDDRIFVCNRNGDTCVTLLDLELYNPKGIALDPAMGKVFFTDYGQIPKVERCDM
DGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTIIQGILIEHL
YGLTVFENYLYATNSDNANAQQKTSVIRVNRFNSTEYQVVTRVDKGGALHIYHQRRQPRV
RSHACENDQYGKPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHELFLVYGKG
RPGIIRGMDMGAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTER
ETILKDGIHNVEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAI
VVDPLNGWMYWTDWEEDPKDSRRGRLERAWMDGSHRDVFVTSKTVLWPNGLSLDIPAGRL
YWVDAFYDRIETILLNGTDRKIVYEGPELNHAFGLCHHGNYLFWTEYRSGSVYRLERGTG
GSPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQ
VLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPALCHQH
TCPSDRFKCENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW
TCDLDDDCGDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCSH
SCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHTDEFQCRLDG
LCIPLRWRCDGDTDCMDSSDEKSCEGVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCED
NSDEENCESLACRPPSHPCANNTSVCLPPDKLCDGNDDCGDSSDEGELCDQCSLNNGGCS
HNCSVAPGEGIVCSCPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWV
LEPDGESCRSLDPFKPFIIFSNRHEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYW
TDVVEDKIYRGKLLDNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKL
DGTLRTTLLAGDIEHPRAIALDPRDGILFWTDWDASLPRIEAASMSGAGRRTIHRETGSG
GWPNGLTVDYLEKRILWIDARSDAIYSARYDGSGHMEVLRGHEFLSHPFAVTLYGGEVYW
TDWRTNTLAKANKWTGHNVTVVQRTNTQPFDLQVYHPSRQPMAPNPCEANGGRGPCSHLC
LINYNRTVSCACPHLMKLHKDTTTCYEFKECLLYARQMEIRGVELDPYYNYILSFTPDID
KCHCDWTPMPAEQRVYLSDVRTQAIKRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFW
TSYDTNKKQINVARLDGSFKNAVVQGLEQPHSLVVHPLRGKLYWTDGDNISMANMDGSNR
TLLFSGQKGPVGLAIDFPESKLYWISSRNHTINRCNLDGSGLEVIEAMRSQLGKATALAI
MGDKLWWADQVSEKMGTCNKADGSGSVVLRNSTTLVMHMKVYDESPQLDHEGTNPCSINN
GDCSQLCLPTSETTRSCMCTAGYSLRSGQQACEGQKPPLCWVLWGRGGTLPQPPSSAPSP
LLSTVNPQHSVSASPPLENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIAVDW
IAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKGYLFWTEWGQYPRIE
RSRLDGTERVVLVNVSISWPNGISVDYEDGKLYWCDARTDKIERIDLETGENREVVLSSN
NMDMFSVSVFEEFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFNRDRQK
GTNVCAVTNGGCQQLCLYRGGGQRACACAHGMLAEDGASCREYAGYLLYSERTILKSIHL
SDERNLNAPVQPFEDPEHMKNVIALAFDYRAGTSPGTPNRIFFSDIHFGNIQQINDDGSG
RTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTRPGAFERETVITMSGDDHP
RAFVLDECQNLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFS
DATLDKIERCEYDGSHRYVILKSEPVHPFGLAVYGEHIFWTDWVRRAVQRANKFVGSDMK
LLRVDIPQQPMGIIAVANDTNSCELSPCRVNNGGCQDLCLLTHQGHVNCSCRGGRILQED
FTCRAVNSSCRAQDEFECASGECINFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCS
NGRCVSNMLWCNGADDCGDGSDEIPCNKTACSVGEFRCRDGTCIGNSSRCNQFVDCEDAS
DEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCGDYSDERDCPGMKRP
RCPLNYFACPSGRCIPMSWTCDKEDDCEHGEDETHCNKFCSETQFECQNHRCISKQWLCD
GSDDCGDGSDEAAHCEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESVAAGCLY
NSTCDGREFMCQNRQCIPKHFVCDHDRDCADGSDESPECEYPTCGPNEFRCANGRCLSSR
QWECDGENDCHDQSDEAPKNPHCTSSEHKCNASSQFLCSSGRCVAEVLLCNRQDDCGDGS
DERGCHINECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQ
RCINTHGSYKCLCVEGYAPRGGHPHSCKAVTDEEPFLIFANRYYLRRLNLDGSNYTLLKQ
GLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSSVQVLHRTGLSNPDGLAVDWVGG
NLYWCDKGRDTIEVSKLNGAYRTVLVSSGLSEPRALVVDVQNGYLYWTDWGDHSLIGRIG
MDGSGRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVVLSQDIPHI
FALTLFEDYVYWTDWETKSINRAHKTTGANKTLLISTLHRPMDLHVFHALRQPDVPNHPC
KVNNGGCSNLCLLSPRGGHKCACPTNFYLGSDGRTCVSNCTASQFVCKNDKCIPFWWKCD
TEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDCQDNSDEANCDIHVCL
PSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCD
RDNDCVDGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDEPKEECDER
TCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC
DGDHDCADGSDEKDCTPRCDMDQFQCKSGHCIPLRWRCDADADCMDGSDEEACGTGVRTC
PLDEFQCNNTLCKPLAWKCDGEDDCGDNSDENPEECAQFLCPPNRPFRCKNNRVCLWIGR
QCDGTDHCGDGTDEEDCEPPTAQMPHCKDKKEFLCRNQRCLSSSLRCNMFDDCGDGSDEE
GCSIDPKLTSCAANTSICGDEARCVRTEKAAYCACRPGFHTVPGQPGCQDINECLRFGTC
SQLCNNTKGSHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEIRSLFPGHPHSAYEQAF
QGDESVRIDAMDVHVKAGRVYWTNWHTGTISYRSLPPAAPPTTSNRHRRQIDRGVTHLNI
SGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGENRKTLISGMIDEPHAIVVDPLRGT
MYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSIIGSIRL
NGTDPVVAADSKRGLSHPFSIDVFEDYIYGVTYINNRVFKIHKFGHSPLVNLTGALSHAS
DVVLYHQHKQPEVTNPCDRKKCEWLCLLSPSGPVCTCPNGKRLDNGTCVAVPSPTPPPDA
PRPGTCNLQCFNGGSCFLNARRQPKCRCQPRYTGDKCELDQCWEYCRNGGTCAASPSGMP
TCRCPTGFTGPKCTQQVCAGYCANNSTCSVNQGNQPQCRCLPGFLGDRCQYRHCSGYCEN
FGTCQMAADGSRQCRCTAYFEGPRCEVNKCSRCLEGTCVVNKQSGDVTCNCSDGRVAPSC
LTCVGHCSNGGSCTMNSKMMPECQCPPHMTGPRCEEQVVSQEQPGHMASILIPLLLLLLL
LLVAGVVFWYKRHVRGAKGFQHQRMTNGAMNVEIGNPTYKMYEGGEPDDVGGLLDADFAL
DPDKPTNFTNPVYATLYMGGHGSRHSLASTDEKRELLGRGPEDEIGDPLA
Download sequence
Identical sequences G3SXA6
ENSLAFP00000005024 ENSLAFP00000005024

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.