SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLAFP00000006283 from Loxodonta africana 69_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLAFP00000006283
Domain Number 1 Region: 370-501
Classification Level Classification E-value
Superfamily C-type lectin-like 1.2e-41
Family C-type lectin domain 0.0000877
Further Details:      
 
Domain Number 2 Region: 229-365
Classification Level Classification E-value
Superfamily C-type lectin-like 1.49e-37
Family C-type lectin domain 0.00045
Further Details:      
 
Domain Number 3 Region: 820-947
Classification Level Classification E-value
Superfamily C-type lectin-like 4.05e-34
Family C-type lectin domain 0.00037
Further Details:      
 
Domain Number 4 Region: 954-1104
Classification Level Classification E-value
Superfamily C-type lectin-like 2.36e-33
Family C-type lectin domain 0.00045
Further Details:      
 
Domain Number 5 Region: 512-646
Classification Level Classification E-value
Superfamily C-type lectin-like 2.75e-31
Family C-type lectin domain 0.0012
Further Details:      
 
Domain Number 6 Region: 654-804
Classification Level Classification E-value
Superfamily C-type lectin-like 3.04e-28
Family C-type lectin domain 0.00059
Further Details:      
 
Domain Number 7 Region: 1253-1390
Classification Level Classification E-value
Superfamily C-type lectin-like 1.08e-26
Family C-type lectin domain 0.0023
Further Details:      
 
Domain Number 8 Region: 35-166
Classification Level Classification E-value
Superfamily Ricin B-like lectins 3.79e-25
Family Cysteine rich domain 0.0028
Further Details:      
 
Domain Number 9 Region: 1119-1240
Classification Level Classification E-value
Superfamily C-type lectin-like 1.33e-24
Family C-type lectin domain 0.0015
Further Details:      
 
Domain Number 10 Region: 166-224
Classification Level Classification E-value
Superfamily Kringle-like 7.14e-20
Family Fibronectin type II module 0.00094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000006283   Gene: ENSLAFG00000007467   Transcript: ENSLAFT00000007472
Sequence length 1473
Comment pep:novel supercontig:loxAfr3:scaffold_31:28651260:28679997:1 gene:ENSLAFG00000007467 transcript:ENSLAFT00000007472 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RPAPAPWSHHLLRCVLFLGGLHLGCPADAAAPPEPNVFLIFNHGLQGCLEAQGGQVRVTA
ACNASLPAQRWKWVSRNRLFNLGAMQCLGTGWPGTNTTASLGMYECDREALNLRWHCSTL
GDQLSLLLGGRASNATKAGTPERGDQTRSGQWHIYGSDEDLCARPYYEVYTIQGNSHGKP
CTIPFKYDNQWFHGCTSTGREDGHLWCATTQDYGKEERWGFCPIKSNDCETFWDKDQLTD
SCYQFNFQSTLSWREAWASCEQQGADLLSITEIHEQTYINGLLTGYSSTLWIGLNDLDTS
GGWQWSDNSPLKYLNWESDQPDNPSDENCGVIRTESAGGWQNRDCSIALPYVCKKKPNAT
VEPTPPDVWANVKVECEPSWQPFQGHCYRLQAEKRSWQESKKACLRGGGDLLSIHSMAEL
EFITKQIKQEVEELWIGLNDLKLQMNFEWSDGSLVSFTHWHPFEPNNFRDSLEDCVTIWG
PEGRWNDSPCNQSLPSICKKAGQLSQGTADEDHGCRKGWTWHSPSCYWLGEQVTYSEARR
LCTDHGSQLVTITNRFEQAFISSLIYNWDGEYFWTALQDLNSTGSFRWLSGDEVMYTHWN
RDQPGYSRGGCVALATGSAMGLWEVKNCTAFRARYICRQSLGTPVTPELPGPDPTPSLSG
TCPQGWASDPKLRHCYKVFSSDRLQDKRSWAQAQGACQELGAQLLSLASYEEEHFVANML
NKIFGESEPEIHEQHWFWMGLNRRDPGAGQSWRWSDGLGFSYHNFDRSRHDDDDIRSCAV
LDLASLQWMAMQCETQLDWICKIPRGTDVREPDLSPQGRREWLRFQEAEYKFFEHHSTWA
QAQRICTWFQAELASVHSQAELDFLGHNLQKFSRGQEQHWWIGLHTLENNGRFRWTDGSI
INFISWAPGKPRPIGKDKKCVYMTANREDWGDQRCLTALPYICKRSNTTRETQPPDLLPT
TLGGCPSGWNQFLNKCFRIQGDDPQDRVKWSEAQFSCEQQEAQLVTIANPLEQAFITTSL
PNVTFDLWIGLHASQRDFQWVEQEPLLYANWAPGEPSGPSPAPSGNKPTSCVVVLHSLSA
PFTGRWDDRSCTEETHGFICQKGTDPSLSPSPAALPPAPGTDLSYLNGTFRLLQKPLRWH
DALLLCESRNASLARVPDPYTQAFLTQAARGLRTPLWIGLASEEGSRQYSWVSEEPLGYV
SWQDGEPQQPGGCAYVDMDGSWRTTSCETKLQGAVCGVNGGPRPPRKISYHGSCPQGLAD
SAWIPFREHCYSFHLELLLGHKEALQRCQRAGGAVLSILDEVENVFVWEHLQSSEGQSRG
AWLGMNFNPKGGTLVWQDNTAVNYSNWGPPGLGPSMLSHNSCYWIQSSSGLWRPGACTNI
TMGVVCKLPRGEPEVHLATAALPENPAALVVVLMAVLLLLALLTAALILYRRRKSIERGA
FEGARYSRSSSGPSEATEKNILVSDMEMNEQQD
Download sequence
Identical sequences G3ULH7
ENSLAFP00000028686 ENSLAFP00000006283

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]