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  Home > Genomes > Loxodonta africana 69_3 > ENSLAFP00000006988

Domain assignment for ENSLAFP00000006988 from Loxodonta africana 69_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSLAFP00000006988
Domain Number 1 Region: 2247-2373
Classification Level Classification E-value
Superfamily Cadherin-like 2.75e-31
Family Cadherin 0.0015
Further Details:      
 
Domain Number 2 Region: 1112-1239
Classification Level Classification E-value
Superfamily Cadherin-like 4.71e-31
Family Cadherin 0.001
Further Details:      
 
Domain Number 3 Region: 3304-3415
Classification Level Classification E-value
Superfamily Cadherin-like 2.28e-29
Family Cadherin 0.00067
Further Details:      
 
Domain Number 4 Region: 2994-3102
Classification Level Classification E-value
Superfamily Cadherin-like 3.93e-27
Family Cadherin 0.001
Further Details:      
 
Domain Number 5 Region: 1005-1123
Classification Level Classification E-value
Superfamily Cadherin-like 9.03e-27
Family Cadherin 0.00076
Further Details:      
 
Domain Number 6 Region: 3752-3935
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.58e-26
Family Laminin G-like module 0.006
Further Details:      
 
Domain Number 7 Region: 2779-2887
Classification Level Classification E-value
Superfamily Cadherin-like 1.96e-26
Family Cadherin 0.0011
Further Details:      
 
Domain Number 8 Region: 2045-2152
Classification Level Classification E-value
Superfamily Cadherin-like 3e-25
Family Cadherin 0.001
Further Details:      
 
Domain Number 9 Region: 3403-3522
Classification Level Classification E-value
Superfamily Cadherin-like 2.71e-23
Family Cadherin 0.0014
Further Details:      
 
Domain Number 10 Region: 3095-3197
Classification Level Classification E-value
Superfamily Cadherin-like 4.14e-23
Family Cadherin 0.0039
Further Details:      
 
Domain Number 11 Region: 801-904
Classification Level Classification E-value
Superfamily Cadherin-like 5.71e-23
Family Cadherin 0.00089
Further Details:      
 
Domain Number 12 Region: 1530-1638
Classification Level Classification E-value
Superfamily Cadherin-like 8.42e-23
Family Cadherin 0.0013
Further Details:      
 
Domain Number 13 Region: 695-807
Classification Level Classification E-value
Superfamily Cadherin-like 3.14e-22
Family Cadherin 0.0021
Further Details:      
 
Domain Number 14 Region: 1739-1859
Classification Level Classification E-value
Superfamily Cadherin-like 2.28e-21
Family Cadherin 0.0012
Further Details:      
 
Domain Number 15 Region: 907-1010
Classification Level Classification E-value
Superfamily Cadherin-like 2.57e-21
Family Cadherin 0.0028
Further Details:      
 
Domain Number 16 Region: 2462-2572
Classification Level Classification E-value
Superfamily Cadherin-like 3.43e-21
Family Cadherin 0.0015
Further Details:      
 
Domain Number 17 Region: 1424-1536
Classification Level Classification E-value
Superfamily Cadherin-like 6.94e-21
Family Cadherin 0.0023
Further Details:      
 
Domain Number 18 Region: 1217-1325
Classification Level Classification E-value
Superfamily Cadherin-like 2.28e-20
Family Cadherin 0.0037
Further Details:      
 
Domain Number 19 Region: 136-227
Classification Level Classification E-value
Superfamily Cadherin-like 3e-20
Family Cadherin 0.0026
Further Details:      
 
Domain Number 20 Region: 2889-3000
Classification Level Classification E-value
Superfamily Cadherin-like 3.53e-19
Family Cadherin 0.006
Further Details:      
 
Domain Number 21 Region: 2152-2259
Classification Level Classification E-value
Superfamily Cadherin-like 4.71e-19
Family Cadherin 0.003
Further Details:      
 
Domain Number 22 Region: 3201-3303
Classification Level Classification E-value
Superfamily Cadherin-like 5.28e-19
Family Cadherin 0.0017
Further Details:      
 
Domain Number 23 Region: 2359-2457
Classification Level Classification E-value
Superfamily Cadherin-like 7.57e-18
Family Cadherin 0.0013
Further Details:      
 
Domain Number 24 Region: 1643-1758
Classification Level Classification E-value
Superfamily Cadherin-like 8.28e-18
Family Cadherin 0.0022
Further Details:      
 
Domain Number 25 Region: 2560-2670
Classification Level Classification E-value
Superfamily Cadherin-like 7.99e-17
Family Cadherin 0.0032
Further Details:      
 
Domain Number 26 Region: 544-645
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000000101
Family Cadherin 0.0029
Further Details:      
 
Domain Number 27 Region: 2676-2786
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000000000003
Family Cadherin 0.0024
Further Details:      
 
Domain Number 28 Region: 1847-1968
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000000000671
Family Cadherin 0.0074
Further Details:      
 
Domain Number 29 Region: 362-458
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000000243
Family Cadherin 0.005
Further Details:      
 
Domain Number 30 Region: 1954-2057
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000000271
Family Cadherin 0.0022
Further Details:      
 
Domain Number 31 Region: 1335-1435
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000000101
Family Cadherin 0.012
Further Details:      
 
Domain Number 32 Region: 3517-3609
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000183
Family Cadherin 0.021
Further Details:      
 
Domain Number 33 Region: 32-148
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000424
Family Cadherin 0.0041
Further Details:      
 
Domain Number 34 Region: 3938-3979
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000876
Family EGF-type module 0.0075
Further Details:      
 
Domain Number 35 Region: 3976-4013
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000326
Family EGF-type module 0.03
Further Details:      
 
Weak hits

Sequence:  ENSLAFP00000006988
Domain Number - Region: 446-528
Classification Level Classification E-value
Superfamily Cadherin-like 0.000257
Family Cadherin 0.0084
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000006988   Gene: ENSLAFG00000008329   Transcript: ENSLAFT00000008333
Sequence length 4340
Comment pep:novel supercontig:loxAfr3:scaffold_1:71480229:71557568:-1 gene:ENSLAFG00000008329 transcript:ENSLAFT00000008333 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MTIALLGFTFFLLLCVTCEKPLEGITSSSAWHFTHSLYNATIYENSAPKTYVESSVKMGI
YLTEPQWIVKYRIISGDVANVFKTEEYMVGNFCFLRIRTKSSNTALLNREVQDSYTLIIQ
ATEKTLELEALTRVVVHILDQNDLKPLFSPPSYKVTISEDMPLKSPICKVTATDADLGQN
AEFYYSFNTKSEMFAIHPTSGVVTVAGKLNVTWRGRYELQVLAVDRMRKISEGNGFGNLA
ALVIQVEPAPRKPPAIASVVVTPPDGNEGTTYATVVVDANSSGADVDSVEIVGGDPGKHF
KAIKSYAQSNEFSLVSIKSINWMEHLHGFNLSLQARSRSSPAFYSQIRGFHLPPSKLASL
KFEKAVYRVKLSEFSPPGSRVVMVKVTPNFPSLRYVLKPSSESTGFKLNAHTGMITTTKL
LDFQDQAYYQLHIKTSLGLASTTVVINIMDCNNHAPIFHRSSYAATFDENIPPGTSCTDQ
DHGRMICHYHAVKSMPFLSTLLGSSLPPDYELMKYTFRVWASDWGSPFRRVKEVSISLRL
NNLNDNQPVFEEVNCTVSIHKDSPVRRSIMNISAIDVDELQNLKYEIVSGNELGYFDINH
FSGEISLNRAFMNHTAGQPTNYSLQITASDGQYYALPTTLNITVVKDSRFEVPVTCHKRG
VLAHITKTIILHSVGFQNQESNAEEFTFLSTYQINHHTPQFEDHLPQSIDILEHVSVNTS
LAHLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLSVSAPLDYEATSFYILNITVY
DLGTPPKSSWKLLTVNVIDWNDNAPRFPPGGYQVTISEDAEVGSTIAELKAKDADSEDNG
RVRYTLLSPTEKFSLHPLTGELVVTGHLDRESESQYILKVEARDQPRKGHQLFSVTDLIV
TLEDANDNSPQCFTELSSLKVPEDLPPGTILTFLDASDPDLGPAGEVQYILLDDVHGTFQ
VDLTTGALSLEKELDFETQTGYNLSLWASDSGKPLARRTLCHVEVIVLDVNENLHPPHFT
SFVHQGQVQEDSPLGTQVMVVAAHDDDSGLDGEIQYFLRAGTDLAAFSINQDTGAIQTTA
PLDREFISYYWLTVLAVDKGSVPLSSVTEVYIEVTDVNDNPPRISRPVFYPSVREDAPLN
TSVLQLDAWDPDSSSNGKLTFNITSGNHMGFFVIHPLTGLLSTARKLDRENKDEHILEVT
VLDNGEPPLKSTSRVVVRVLDVNDNPPVFSHKLFNVRLPERLNLATPGPVYRLVASDLDE
GLNGRVTYIIEESDEEGFSIDPVTGVVSSSNIFAAGEYNILTIKATDSGQPPLSASVRLH
IEWIPRPRPSSIPLAFEETHYSFTVMETDPVNHMVGVISVEGRPGLFWFNIAGGDKDMDF
DIEKTMGSIVIARPLDTRRRASYNLTVEVTDGSHIIATQVYIFTVANVNRHRPQFLESHY
EVRVPQDTLPGVELLQVQATDQDNGKGLIYTIHGSQDPGSASLFQLDPSSGVLVTVGKLD
LGLGPSQHTLTVMVRDQEMPIKRNFVWVTIHVEDKNLHPPRFTQLHYEAQVPDTTAPGTD
LLQVRAIDDDRGANAEVHYSFQKGNSEGFFSISVLLGIITVARKLDQAYHAQHTLTVRAE
DQGSPQRYDLATVVIHISPSESSTPIFSKAEYFVEIPELIPIGSPILLVSATSYSEVTYE
LREGNKNGVFSMNSYSGLISTQKSLDHEKISSYQLKIRGSNMAGASTDVMVLVYIIDEND
NAPKFLKPTFVGQISEAAPLHSMVMDENNSPFVIHAIDSDKEANSLLVYKILDPEALKFF
KIDPSMGTLTIVSEMDYESMPSFQFSVYVHDQGNPILFAPRPAQVIINVRDVNDSPPRFL
DPMYEVAVVGPTHKGMELLMVQASDDDSEINYSIKTGNADEAVTIHPITGVISVLNPAFL
RFSREVTIRASDGLYQDTALVKITLTQALNTSLQFDQDVYRVAVKENLQSRKALVILGVQ
GNHLNDTLSYFLLNGTDLFGMIRSAGVLQTRGVEFDREQQDIHEVAVEVRDNRTPQRVAQ
AVVRVSVEDVNDNPPEFQHLPYYTIIQDGTEPGDVLFQVSATDQDLGVNGVVTYAFAEDY
TYFRIDPYLGDISLKKPFDYKALNKYCLKVIARDRGNPSLQAEEEVHVTVRNKSNPLFQS
PYYKVRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFNTDFKTGVLTVTGPLDY
ESKTKHIFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYTTSVSEGLPAQTPVIQ
LLASDRDSGQNRDVSYQIVEDGSDISKFFQINGSTGEMSTAQELDYEAQQHFHMKVRAMD
RGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCGHLVLKVQALDPDSRDTSC
LEYLILSGNQDRHFSINSSSGIISMLNLCKKHLDSSYKLRVGASDGVFQTVVPVYINTTN
ANKYSPEFQQHVYEAELAENAKVGTKVIELLAIDKDSGPYGTIDYTIINKLAGEKFSINP
SGQITTLQKLDRENSTERVIAIKVMAQDGGGRVAFCTVKIILTDENDNPPQFKASEYTVS
IQSNVSKDFPVIQVLAYDADEGQNADVTYSVDSVENLAEEVIEVNPTTGVVKVKESLVGL
ENRAFDFKIKAQDGGPPHWDSMVPVQLQVVSNEAPLPKFSEPLYTFSAPEDLPEGSDIGL
VKAVAAQDPVIYSLVQGTTPESNKDGVFSLDQNTGVLKVKKAMDYESTKWYQIDVMAHCS
HKDTDLVSLVSINIQVKDVNDNRPIFEADPYKAFLTENMPVGTTVIQVTANDQDTGSDGR
VSYRLAVDPGSNVHELFAIDSESGWITTLQELDSETRQSYSFYVVAYDHGQTLQLSSEAL
IEVSITDENDNAPRFASEDYRGFVVENSEPGELVATLKTLDDDISEQNRQVTCYITEGDP
LGQFGISQAEDEWRIFSRKTLDRELTAKYLLSVTASDGKFQASVPVEIFVLDINDNSPQC
SQLLYAGKVSEAVAPGHFVLKVSAIDLDTDTNAQITYSLHGPGSEEFKLDPYTGELTTFR
ALDREKKDVYNLVAKATDGGGRSCQADVTLHVEDVNDNAPRFFPSHCSVAVFDNTTVKTP
VAVVFARDPDQGTNAQVVYSLTGSDEGHFSIEATTGVIRLEKPLRDRPQAVLELTVRASD
LGTPTPLSTLGTVTVSVVGLDDYLPVFLSTEYNVQVREDTQPGTEVLHLAALTRPGAEKT
GYRIVSGNEQGRFRLHTHTGVLYVNRSLDFETSPKYFLSIECSRKGSSSLSDMTTIVVNI
TDVNEHQPRFLQDLYSVKVLENAIVGDIILTVSATDEDGPLNNAITYSLVGGNQLGHFTI
HPKTGELQVAKALDWEQTSSYLLRLRATDSGQPPLHEDTDIDIQVVDVNDNPPRFFQLNY
STTVQENSPIGSKVLQLILSDPDSPENGPPYSFQITNGNIGSAFRVTADGWLVTTAGLSR
RVQERYELQIEVSDSGVPPLSSLTSVSIHVTEQSHYPPSALPLEIFITIGEEEFQGGMVG
KIHATDRDPQDTLTYSLAGEETLGRRFSVGAPDGKIIAAQALPRGRYSFNITVSDGTFTA
TAGVHVHVWHVGREALQQAMWMGFHQLTPEELVSDHWRNLQRFLSNKLDIKRANIHLASL
QPAEAMAGVDVLLVFEGHSGTFYKLQELASIITRSAKEMEHSVGIQMRSAMPVVPCQGPS
CQGQICQETVHLDPKVGPTYSTARLSILTPRHHLKKNCSCNGTAVRFSGQSYVRYHLPET
QSSHVGFRLKTLQPQAVVLFANGTVSLSLRLVGGVFQLEYRCPGGFHGNLFSQRPVNDQE
WHSIQLEKTSTSIGLWVDGAGNGSLVLPENCQGLGPTRDLLLGSLVLSQSSQNVSQGFEG
CLDAVMVNGEVLELLVHGRKVAHLLEKQALTQCCPLSDDCRQNPCLNGGECSQTHGAGYV
CKCPPQFTGKHCEQGRENCISAPCLGGGTCISSPKGASCSCPYPYTGDRCEMEARGCSEG
HCLVTPEIKTGDWWQQVILIITVVGPFIFFLGVIVMLLLYCRHRKSHKPVAMEDPDLLAR
SIGVDTQAMPAIELNPLSASSCHNLNQAEPSKASVPNELVTFGPSSKQRPMVCSVPPRLP
PAAVPSSSDNESIIKRTWSGEEMVYPDGAPVWSPTYSRKERWEYPHSEVTQGPVPPSPHR
HPTPAMMPEPIGLYGGFPFPLGLENKRAPLPPRYSNQNLEDLMPPRPPSPREHLLDPCLN
EYTAISYYHSQFLQGGGGPCLAEGGYKGVSMRLSRAGPSYADCEVGGGPSTGRGQPQAPP
HYEGSDMVESDYGSCEEVMF
Download sequence
Identical sequences G3T1M1
ENSLAFP00000006988 ENSLAFP00000006988

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.