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  Home > Genomes > Loxodonta africana 69_3 > ENSLAFP00000007621

Domain assignment for ENSLAFP00000007621 from Loxodonta africana 69_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSLAFP00000007621
Domain Number 1 Region: 768-1021
Classification Level Classification E-value
Superfamily YWTD domain 4.45e-45
Family YWTD domain 0.00000878
Further Details:      
 
Domain Number 2 Region: 352-634
Classification Level Classification E-value
Superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase 1.6e-31
Family Oligoxyloglucan reducing end-specific cellobiohydrolase 0.014
Further Details:      
 
Domain Number 3 Region: 1567-1751
Classification Level Classification E-value
Superfamily Fibronectin type III 2.34e-28
Family Fibronectin type III 0.0013
Further Details:      
 
Domain Number 4 Region: 95-316
Classification Level Classification E-value
Superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase 4.58e-20
Family Oligoxyloglucan reducing end-specific cellobiohydrolase 0.0081
Further Details:      
 
Domain Number 5 Region: 1941-2114
Classification Level Classification E-value
Superfamily Fibronectin type III 1.54e-16
Family Fibronectin type III 0.0058
Further Details:      
 
Domain Number 6 Region: 1424-1461
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000249
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 7 Region: 1203-1241
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000615
Family LDL receptor-like module 0.00072
Further Details:      
 
Domain Number 8 Region: 1331-1367
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000785
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 9 Region: 1160-1201
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000314
Family LDL receptor-like module 0.00076
Further Details:      
 
Domain Number 10 Region: 1518-1557
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000511
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 11 Region: 1378-1411
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000628
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 12 Region: 1246-1279
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000103
Family LDL receptor-like module 0.0018
Further Details:      
 
Domain Number 13 Region: 1478-1515
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000013
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 14 Region: 1756-1919
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000246
Family Fibronectin type III 0.0059
Further Details:      
 
Domain Number 15 Region: 1123-1161
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000196
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 16 Region: 1283-1318
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000393
Family LDL receptor-like module 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000007621   Gene: ENSLAFG00000009079   Transcript: ENSLAFT00000009088
Sequence length 2220
Comment pep:novel supercontig:loxAfr3:scaffold_58:9462159:9657545:1 gene:ENSLAFG00000009079 transcript:ENSLAFT00000009088 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MATGSSRRESRLPFLFTLVALLPPGALCEVWTQTLHGGRAPSPQDRGFLVVRGDPRELQL
WARGDAWGASPADEKPLRRRRSAALQPEPIKVYGQVRLNDSHNQMVVHWAGEKSNVIVAL
ARDSLSLARPKSSDVYVSYDYGKSFKKISEKLNFGLGNSSESVIAQFYHSPADNKRYIFV
DAYAQYLWITFDFCNTLQGFSIPFRAADLLLHSKASNLLLGFDRSHPNKQLWRSDDFGQT
WIMIQEHVKSFSWGIDPYDKPNTIYVERHEPFGYSTVFRSTDFFQSWENQEVILEEVKDF
QLRDKYMFATKVVRLSGNQQQSSVQLWVSFGRKPMRAAQFVTRHPINEYYIADASEDQVF
VCVSHSNNRTNLYISEAEGLKFSLSLENVLYYSPGGAGSDTLVRYFANEPFADFHRVEGL
QGVYIATLINGSMKEENMRSVITFDKGGTWEFLQAPAFTGYGEKINCELSQGCSLHLAQR
LSQLLNFQLRRMPILSKESAPGLIIATGSVGKNLASKTNVYISSSAGARWREALPGPHYY
TWGDHGGIIVAIAQGTETNELKYSTNEGETWKTFLFSERPVFVYGLLTEPGEKSTVFTIF
GSNKENVHSWLILQVNATDALGVPCTENDYKLWSPSDERGNECLLGHKTVFKRRTPHATC
FNGEDFDRPVIVSNCSCTREDYECDFGFKMSEDLSLEVCVPDPEFPGKSYSAPVPCPVGS
TYRRTRGWGGDSYRKISGDTCSGGDVEARLEGELVPCPLAVCTEENEFILYATRKSIYRY
DLASGATEELPLTGLRAAVALDFDYEHNCLYWSDLALDIIQRLCLNGSTGQEVIINSGLE
TVEALAFEPLSQLLYWVDAGFKKIEVANPDGDFRLTIVNSSVLDRPRALVLIPQEGIMFW
TDWGDLRPGIYRSNMDGSAVHRLVSEDVKWPNGISVDDQWVYWTDAYLDCIERIRFSGQQ
RSVILSSLPHPYAIAVFKNEIYWDDWSQLSIFRASKHSGSQMEILASQLTGLMDMKIFYK
GKTTGSNACVSKPCSLLCLPKANHSRICQCPEGVSSKVLPSGDLMCDCPQGYQLENNTCV
KEVETCWYTEYRSTQGFDVNPLQPCHFLHSSPSSQQELNYTTTVCDLDTQFRCQESGTCI
PLSYKCDLEDDCGDNSDESHCETHQCRSDEYNCSSGMCIRSSWVCDGDNDCRDWSDEANC
TAVYHTCEASNFQCHNGHCIPQRWACDGDMDCQDGSDEDPVNCEKKCNGFRCPDGVCIPS
SKHCDGLHDCSDGSDEQHCEPLCTRFMDFVCKNRQQCLFHSMVCDGIVQCRDGSDEDANF
AGCSQDTEFHKVCDQFSFQCQNGVCISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYF
RFQCENGHCIPNRWKCDQENDCGDWSDEKDCGDSHILPSPTPGPTTCLPNYYRCSSGACV
MDSWVCDGYRDCADGSDEEACPSPANVTATSTTTQLGRCDRFEFECRQPKKCIPNWKRCD
GHQDCQDGQDEANCPTHSTLTCTGREFRCEDGETCIVLSERCDGFLDCSDGSDEMACSDE
LTVYKVQNLQWTADFSGDVTLTWMRPKKMPSSCVYNVYYRVVGESIWKALETHSNKTSAV
LKVLKPDTTYQVKVQVQCLSKVHNTNDFVNLRTPEGLPDAPQNLQLSLYNEAEGVIVGHW
TPPAHTHGLVREYIVEYSRSGSKIWTSQRADSNSTEIKDLLVNALYTVRVAAVTSRGIGN
WSDSKSITTIKGKVIPPPDIHIDSYGENSLSFTLTMNSDIQVNGYVVNLFWAFDAHKQEK
RTLNLQGSILSHKVSNLTAHTSYEISAWAKTDLGDSPLAFEHVMTKGTRPPAPSLKAKAI
NQTAVECTWTGPRNVVYGIFYATSFLDLYGNPKSLTTSLHNGTVIVSGDEQYLFLVRVVE
PYEGPSSDYVVVKMIPDSRLPPRHLHAVHTGKTSAVIKWESPYDSPDQDLLYAIAVKDLI
RKTDRSYKVRSRNSTVEYTINKLEPGGKYHVIVQLGNMSKDSSIKITTVSLSAPDALKII
TENDHVLLFWKSLALKEKHFNESRGYEVHMFDSAMNISAYLGNTTDNFFKISNLKMGHNY
TFTVQARCLFGNQICGEPAVLLFDDLGTGADASAIQGARSTDVAAVVVPILFLILLSLGV
GFAILYVKHRRLQSSFTAFANSHYSSRLGSAIFSSGDDLGEDDEDAPMILDFDDVPMVIA
Download sequence
Identical sequences G3T328
ENSLAFP00000007621 ENSLAFP00000007621

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.