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  Home > Genomes > Loxodonta africana 69_3 > ENSLAFP00000008467

Domain assignment for ENSLAFP00000008467 from Loxodonta africana 69_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSLAFP00000008467
Domain Number 1 Region: 128-318
Classification Level Classification E-value
Superfamily vWA-like 1.95e-60
Family Integrin A (or I) domain 0.0000662
Further Details:      
 
Domain Number 2 Region: 2297-2503
Classification Level Classification E-value
Superfamily vWA-like 5.15e-57
Family Integrin A (or I) domain 0.0002
Further Details:      
 
Domain Number 3 Region: 433-617
Classification Level Classification E-value
Superfamily vWA-like 5.7e-57
Family Integrin A (or I) domain 0.00016
Further Details:      
 
Domain Number 4 Region: 1222-1377
Classification Level Classification E-value
Superfamily vWA-like 2.97e-41
Family Integrin A (or I) domain 0.00042
Further Details:      
 
Domain Number 5 Region: 2524-2726
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 9.79e-34
Family Laminin G-like module 0.051
Further Details:      
 
Domain Number 6 Region: 725-896
Classification Level Classification E-value
Superfamily Fibronectin type III 2.24e-24
Family Fibronectin type III 0.00088
Further Details:      
 
Domain Number 7 Region: 1755-1925
Classification Level Classification E-value
Superfamily Fibronectin type III 6.02e-22
Family Fibronectin type III 0.0011
Further Details:      
 
Domain Number 8 Region: 2027-2196
Classification Level Classification E-value
Superfamily Fibronectin type III 8.03e-21
Family Fibronectin type III 0.0014
Further Details:      
 
Domain Number 9 Region: 909-1078
Classification Level Classification E-value
Superfamily Fibronectin type III 8.64e-21
Family Fibronectin type III 0.0022
Further Details:      
 
Domain Number 10 Region: 1568-1726
Classification Level Classification E-value
Superfamily Fibronectin type III 1.17e-20
Family Fibronectin type III 0.0019
Further Details:      
 
Domain Number 11 Region: 1384-1471
Classification Level Classification E-value
Superfamily Fibronectin type III 2.06e-20
Family Fibronectin type III 0.00043
Further Details:      
 
Domain Number 12 Region: 335-428,624-712
Classification Level Classification E-value
Superfamily Fibronectin type III 3.25e-20
Family Fibronectin type III 0.0016
Further Details:      
 
Domain Number 13 Region: 1939-2023
Classification Level Classification E-value
Superfamily Fibronectin type III 3.61e-19
Family Fibronectin type III 0.0007
Further Details:      
 
Domain Number 14 Region: 1092-1178
Classification Level Classification E-value
Superfamily Fibronectin type III 1.37e-17
Family Fibronectin type III 0.00079
Further Details:      
 
Domain Number 15 Region: 1471-1562
Classification Level Classification E-value
Superfamily Fibronectin type III 3.37e-17
Family Fibronectin type III 0.00061
Further Details:      
 
Domain Number 16 Region: 2206-2291
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000122
Family Fibronectin type III 0.0022
Further Details:      
 
Domain Number 17 Region: 26-108
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000111
Family Fibronectin type III 0.00086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000008467   Gene: ENSLAFG00000010089   Transcript: ENSLAFT00000010100
Sequence length 3122
Comment pep:novel supercontig:loxAfr3:scaffold_0:90663448:90780777:1 gene:ENSLAFG00000010089 transcript:ENSLAFT00000010100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MRNRLPPALAALGAALLLSSIEAEVDPPSDLNFKIIDENTVHMSWARPADPIVGYRITVD
PTTEGPTKEFTLAASTTETLLSDLIPEIEYVVTIASYDEVEESVPVIGQLTIQTGGPTKP
GEKKPRKTEIQKCSVSAWTDLVFLVDGSWSVGRNNFKYILDFIAALVSAFDIGEAKTRVG
VIQYSSDTRTEFNLNQYYQRDELLAAIKKIPYKGGNTMTGDAIDYLIKNTFTESAGARVG
FPKVAIIITDGKSQDEVEIPARELRNIGVEVFSLGIKAADAKELKQIASTPSLNHVFNVA
NFDAIVDIQNEIISQVCSGVDEQLGELVSGEEVIEPPSNLIATEVSSKYIKLSWSPSPSP
VTSYKVLLTPMTAGSRQHALSVGPQTTMLSVRDLSADTEYQISVSAMKGLTSSEPVSIME
KTQPMKVQVECSRGVDIKADIVFLVDGSYSIGIANFVKVRAFLEVLVKSFDISPNRVQIS
LVQYSRDPHTEFTLKKFTKVEDIIEAINTFPYRGGSTNTGKAMTYVREKIFVPSKGSRSN
VPKVMILITDGKSSDAFRDPAIKLRNSDVEIFAVGVKDAVRSELEAIASPPPETHVFTVE
DFDAFQRISFELTQSICLRIEQELAAIKKKVAYVPPKNLTFSEVTSYSFKSNWSPAGENV
FSYHITYKEMAGDGEVTVVEPASSTSVVLTNLKPETQYLVNVTAEYEDGFSVPISGEETT
EEVKGAPRNLKVTDETTDSFKITWTQAPGRVLRYRIIYKPVNGGESKEVTTPANQRRRTL
ENLTPDTKYEVSVIPEYYSGPGSPLTGNAATEPNEVRGNPRDLKVSDPTTSTMKLSWTRA
PGKVKQYLITYTAVAGGETQEVTVRGDTTNTVLSGLKEGTQYALSVTALYASGAGDALFG
EGTTLEERGSPQNLVTKDITDTSIGAYWTSAPGMVRGYRVSWKSLYDDIETGEKNLPGDS
IHTVIENLQPETKYKISVFATYTSGEGEPLTGEATTEISQESKTLKVDEETENTMRVTWK
PAPGKVVNYRVIYRPRGGGKQMVAKVPPTVTSTVLKRLQPQTTYDITVLPIYKTGEGKLR
QGSGTTASRFKSPRNLKTSDPTMSSFRVTWEPAPGEVKGYKVTFHPTGDDRRLGELVVGP
YDNTVVLEELRAGTTYKVNVFGMFDGGESSPLVGQEMTTLSDTTVMPVLSSGMERLTRAE
ADIVIVMIVEHCGPNLRPVKSSFSYVSLEMGQKSTNVALAQYSGDPRTEWQLNAHRDKQS
LLQAVANLPYKGGNTLTGMALNFIRQQSFKTQAGMRPRARKIGVLITDGKSQDDVEGPSK
KLKDEGVELFAVGIKNADEVELKMIATDPDDTHAYNVADFESLSRIVDDLTINLCNSVKG
PGDLEAPSNLVISERTHRSFRVSWTPPSDSVDRYKVEYYPVSGGKRQEFYVSRMETSTVL
KDLKPETEYVVNVYSVVEDEYSEPLKGTEKTLPVPVVSLNIYDVGPTNMRVQWQPVGGAT
GYSLSYEPINATEPTKAKEMRVGPTVNEVQLTDLIPNTEYAVTVQAALHDLTSEPVTARQ
VTSPLPGPRDLKLRDVTHSTMNVLWEPAPGKVRKYIIRYKTPEEDAKEVEADRSRTNTPL
RDLFSQTLYTISVSAVYDEGESPPVTAQDTTKHVPAPTNLRITEVTPETFRGTWDHGASD
VSLYRITWAPFGSSDKMETILNGDENTLVFQNLNPNTLYEVSVTAIYPDESESDDLVGSE
RTVRLIPLTTQAPKSGPRNLQVYNATSNSLTVKWDPASGRVQKYRITYQPSTGEGNEQTT
TIGGRQNSVVLQKLKPDTPYTITVSSLYPDGEGGRMTGRGKTKPLNTVRNLRVYDPSTST
LNVRWDHAEGNPRQYKLFYAPTAGGPEELVPIPGNTNYAILRNLQPDTPYTVTVVPVYSE
GDGGRTSDTGRTLVRGLARNVQVYNPTPNSLDVRWDPAPGPVQQYRIVYSPVAGTRPSES
IVVPGNTGMVHLERLIPDTPYSVNIVALYSDGEGNPSPGQGRTLPRSGPRNLRVFGETTN
SLSVAWDHADGPVQQYRIIYSPTVGDPIDEYTTVPGRRNNVILQPLQPDTPYKITVIPVY
EDGDGGHLTGNGRTVGLLPPQNIHISDEWYTRFRVSWDPSPSPVLGYKIVYKPVDSSEPM
EAFVGEVTSYTLHNLNPSTTYDVNVYAQYDSGLSVPLTDKGTTLYLNVTDLKTYQVGWDT
FCVRWSPHRAATSYRLKLNPADGTRGQEITVRGSETSHCFTGLSPDTEYGVTVFVQTPNL
EGPGVPVKEHTTVKPTEAPTEPPTPPPPPTIPPARDVCKGAKADIVFLTDASWSIGDDNF
NKVVKFIFNTVGAFDEISPAGIQVSFVQYSDEVKSEFKLNTYNDKAQALGALQNIRYRGG
NTRTGKALTFIKEKVLTWESGMRKNVPKVLVVVTDGRSQDEVKKAALIIQQSGFSVFVVG
VADVEYNELANIASKPSERHVFIVDDFESFEKIEDNLITFVCETATSNCPLIYLDGYTSP
EYKGFKMLEAYNLTEKNFASVQGVSLESGSFPSYSAYRLQKNAFVNQPTVDLHPNGLPPS
YTIILLFRLLPETPNDPFAIWQITDRDYKPQVGVIVDPSSKTLSFFNKDTRGEVQTITFD
TDEVKTLFYGSFHKIHIVVTSKSVKIYIDCYEIIEKDIKEAGNITTDGYEILGKLLKGER
KSATFQIQNFDIVCSPVWTSRDRCCDIPSRRDEAKCPALPNACTCTQDSVGPPGPPGPAG
GPGAKGPRGERGISGAIGPPGPRGDTGPPGPQGPPGPQGPNGLSIPGEQGRQGMKGDAGE
PGLPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPPGPPGSPGSPGVTGASGKPGK
PGDHGRPGPSGLKGEKGDRGDIASQNMMRAVARQVCEQLISGQMNRFNQMLNQIPNDYHS
NRNQPGPPGPPGPPGNAGARGEPGPGGQPGFPGSPGMQGPPGERGLPGEKGERGIGSPGP
RGSPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNLGIRGPPGPPGYCDSSQCASIPYNG
QGYPEPYVPEGGAYLPEREPFVVPVEPERTTDEYEDYGADVPAEERPPTQHHARARRSEA
GR
Download sequence
Identical sequences G3UA80
ENSLAFP00000008467 ENSLAFP00000024738

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.