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  Home > Genomes > Loxodonta africana 69_3 > ENSLAFP00000008825

Domain assignment for ENSLAFP00000008825 from Loxodonta africana 69_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSLAFP00000008825
Domain Number 1 Region: 1879-2103
Classification Level Classification E-value
Superfamily Fibrinogen C-terminal domain-like 2.75e-82
Family Fibrinogen C-terminal domain-like 0.00000179
Further Details:      
 
Domain Number 2 Region: 894-1063
Classification Level Classification E-value
Superfamily Fibronectin type III 5.89e-22
Family Fibronectin type III 0.00033
Further Details:      
 
Domain Number 3 Region: 1710-1882
Classification Level Classification E-value
Superfamily Fibronectin type III 6.02e-21
Family Fibronectin type III 0.00062
Further Details:      
 
Domain Number 4 Region: 1617-1706
Classification Level Classification E-value
Superfamily Fibronectin type III 1.4e-19
Family Fibronectin type III 0.00002
Further Details:      
 
Domain Number 5 Region: 714-877
Classification Level Classification E-value
Superfamily Fibronectin type III 7.76e-17
Family Fibronectin type III 0.000016
Further Details:      
 
Domain Number 6 Region: 624-710
Classification Level Classification E-value
Superfamily Fibronectin type III 2.67e-16
Family Fibronectin type III 0.00087
Further Details:      
 
Domain Number 7 Region: 1169-1253
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000073
Family Fibronectin type III 0.0017
Further Details:      
 
Domain Number 8 Region: 1530-1617
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000262
Family Fibronectin type III 0.0017
Further Details:      
 
Domain Number 9 Region: 1257-1344
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000815
Family Fibronectin type III 0.0016
Further Details:      
 
Domain Number 10 Region: 1078-1162
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000197
Family Fibronectin type III 0.0018
Further Details:      
 
Domain Number 11 Region: 1439-1526
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000679
Family Fibronectin type III 0.0027
Further Details:      
 
Domain Number 12 Region: 1350-1435
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000026
Family Fibronectin type III 0.0028
Further Details:      
 
Weak hits

Sequence:  ENSLAFP00000008825
Domain Number - Region: 412-436
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000279
Family EGF-type module 0.063
Further Details:      
 
Domain Number - Region: 381-404
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00102
Family EGF-type module 0.079
Further Details:      
 
Domain Number - Region: 505-528
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0014
Family EGF-type module 0.035
Further Details:      
 
Domain Number - Region: 258-281
Classification Level Classification E-value
Superfamily EGF/Laminin 0.004
Family EGF-type module 0.055
Further Details:      
 
Domain Number - Region: 474-497
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00577
Family EGF-type module 0.042
Further Details:      
 
Domain Number - Region: 348-373
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0093
Family EGF-type module 0.05
Further Details:      
 
Domain Number - Region: 287-311
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0121
Family EGF-type module 0.032
Further Details:      
 
Domain Number - Region: 225-249
Classification Level Classification E-value
Superfamily EGF/Laminin 0.014
Family EGF-type module 0.021
Further Details:      
 
Domain Number - Region: 567-590
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0149
Family EGF-type module 0.085
Further Details:      
 
Domain Number - Region: 319-342
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0167
Family EGF-type module 0.03
Further Details:      
 
Domain Number - Region: 536-560
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0177
Family EGF-type module 0.037
Further Details:      
 
Domain Number - Region: 194-217
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0205
Family EGF-type module 0.043
Further Details:      
 
Domain Number - Region: 443-466
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0326
Family EGF-type module 0.08
Further Details:      
 
Domain Number - Region: 598-621
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0409
Family EGF-type module 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000008825   Gene: ENSLAFG00000010541   Transcript: ENSLAFT00000010542
Sequence length 2110
Comment pep:novel supercontig:loxAfr3:scaffold_6:44756968:44825937:1 gene:ENSLAFG00000010541 transcript:ENSLAFT00000010542 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MGATTRLLVGIFIALLALPTKGGVLKKVIRHKRQSGVNLTLPEENQPVVFNHVYNIKLPM
GSQCSVDLESAGVEKDLAPQSEPSESFQEQTVDGENQIVFTHRINIPRRACGCAAAPDIK
ELLSRLEELESLVSSLREQCTTGASCCPQSAEGRLDTRPFCSGRGNFSTEGCGCVCEPGW
KGPNCSEPECPGNCHLRGQCIEGQCVCPEGFTGEDCSQLACPSDCNDQGKCVNGVCVCFE
GYAGADCSQEVCPVPCSKEHGRCVDGRCVCKDGFAGDDCNEPLCLNNCYNRGRCVENECV
CDEGFTGQDCSELTCPRDCFDRGRCLNGTCSCEEGFTGEDCGQLTCPNACRGQGRCEEGQ
CVCDEGFAGADCSEKRCPADCHNHGRCVAGQCECDDGFTGPECGELKCPNDCSHHGRCVN
GQCVCDEGYTGEDCSQRRCPNDCNSRGRCVQGKCECEQGFQGYDCGEMSCPSDCHQRGHC
VNGMCVCDDGYTGEDCRDLRCPKDCSNRGHCADGQCVCEDGFTGPDCAELSCLNDCHQQG
RCVNGQCVCHEGFMGRDCKEQRCPDDCNGRGRCVDGQCICHEGFTGLDCGQRSCPNDCSN
WGECVSGRCICNEGHAGEDCSEVSPPKDLVVTEVTEETVNLAWDNEMRVTEYLIMYTPTH
AGGLEMQFRVPGNKTSATIRELEPGVEYLIRVFAILENKRSIPVSARVATYLPTPEGLKF
KSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETTYQQTGLAPGQEYE
ISLHIVKNNTRGPGLKRVTTTRLDAPSQVEVKDVTDTTALITWFKPLAEIDGIELSYGIK
DVRGDRTTIDLMPDENQYSIGKLKPDTEYEVSLISRRGDMSSNPARETLTTGLDAPRNLR
RISQTDNSITLEWRNGKAAIDNYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTE
YGIGVSAVKEDKESNPATINAATEIDAPKDLRVSETTETTLNLLWKTPLAKFDHYRLNYS
LPMGQQMQVQLPRDTTSHVLRGLEPGQEYTIILTAEKGRHKSKPARVKASTEQAPELGSF
TVTEVGWDGLQLNWTAADQAYEHFVIQVQEANKVEAAQNLTVPGSLRAAYIPGLKAATPY
TVTIYGVIRGYRTPALSAEASTGDTPKLGEVAVTEVGWDALKLNWTAPEGAYELFFIQVQ
ETDTLEAAHNLTVPGGLRSVDLTGLKADTHYSITIRGVTQDYSTTPVSVEVLTEELPQLG
ELAVTEVGWDGLQLNWTAADQAYEHFVIQVQEANKVEAAQNLTVPGSLRAVYIPGLKAAT
PYRVTIYGVTRGYRTPALSAEASTAKEPEIGNLNVSDITPESFNLSWTATDGVFETFTIE
IIDSNRLLETVEYNISGAERTTHISGLPSSTDFIVYLSGLAPSIRTKTISTTATTEALPL
LENLTISDINPYGFTVSWMASENAFDSFLVTVVDSGKLLDPQEFTLSGTQRKLELRGLIT
GIGYEVMVSGFTQGHQTKPLRAEIVTEAEPEVDNLLVSDATPDGFRLSWTADDGVFDTFV
LKIRDTKKQSEPLEITLLAPERTRDITGLREATEYEIELYGISSGRRSQPVNAIATTAMG
SPKEIIFSDITENSATVSWKAPTAQVESFRITYVPIAGGTPSVVTVDGTQTQTRLVKLIP
GVEYLVNVIAMKGFEESDPISGSLTTALDGPSGLVTANITDSEALAMWQPAIATVDSYVI
SYTGDRVPEITRTVSGNTVEYALTDLQPATDYTLRIFAEKGPQKSSVITTKFTTDLDSPR
DLTATEVQSETALLTWRRPRAPVTGYLLVYESVDGTVKEVILGPDTTSYNLAELSPSTHY
TAKIQALNGPLRSKVIQTIFTTTGLLYPFPKDCSQAMLNGDTTSGLYTIYLNGDKAQPLQ
VYCDMTSDGGGWIVFLRRSNGREDFYRNWKAYAAGFGDHRDEFWLGLDNLSKITAQGQYE
LRVDLRDHGETAYAVYDRFSVGDARSRYKLKVEGYSGTAGDSMAYHNGRSFSTFDKDTDS
AITNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEHSIQFAEMKLRPSNF
RNLEGRRKRA
Download sequence
Identical sequences G3T5T8
ENSLAFP00000008825 ENSLAFP00000008825

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.