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Domain assignment for ENSLAFP00000008827 from Loxodonta africana 69_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLAFP00000008827
Domain Number 1 Region: 242-542
Classification Level Classification E-value
Superfamily SPOC domain-like 2.35e-94
Family Ku80 subunit middle domain 0.000000000282
Further Details:      
 
Domain Number 2 Region: 6-241
Classification Level Classification E-value
Superfamily vWA-like 1.8e-48
Family Ku80 subunit N-terminal domain 0.0000000148
Further Details:      
 
Domain Number 3 Region: 563-710
Classification Level Classification E-value
Superfamily C-terminal domain of Ku80 3.4e-44
Family C-terminal domain of Ku80 0.000000498
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000008827   Gene: ENSLAFG00000010544   Transcript: ENSLAFT00000010544
Sequence length 732
Comment pep:novel supercontig:loxAfr3:scaffold_3:10802668:10905985:-1 gene:ENSLAFG00000010544 transcript:ENSLAFT00000010544 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MARPGNKAAVVLCADVGFAMSNSFLDEESSLEQAKKVMTMFVQRQVFAESKDEVALVLFG
TDGTDNALAQENQYQNITVHRHLMLPDFDLLEDIESKIQPGSKHADILDALVVCMDLIQQ
ETVGKKFEKRHIEVFTDLSSPFSKDQLDVIIHNLKQSGISLQFFLPFSVGGEDGTGDRGD
GSLRLGHHGPSFPQKGITEQQKEGIQVVKRMMMSLEGDSGLDEIYSFSESLRQLCVFKKI
ERRSMPWHCQLTVGSNLAIKIVAYKSIQQETIKKTWAVVDARTLKKEDIQKETVYCLNDD
DETEVPKEDTIQGFRYGSDIVPFSKVDEEQMKYRSEGKCFSVLGFCRSPQVQRRFFMGNQ
VLKVFAEKDDEAAAVALSSLIHALDELDMVAVVRYAYDKKANPQVGVAFPHIKDAYECLV
YVQLPFMEDLRQYMFSSLKNNKKYTPTEAQLNAVDALIDSMSLVKKDEEEDTIEDLFPTT
KIPNPQFQRFFQCLLHRALHPQEPLPPIQQHILNMLDPPTEVTAKSQIPLSEIKTLFPLT
EAIKKRDQITAQDIFQDNQEEGSVSKKCKTEEADIPFSITSMAEGRVTSVGSVNPAENFR
VLVRQKNASFGEVSHQLISHIEQFLDSNETPYFMKSMDCIKAFREEAIQFSEEQRFNSFL
KALQEKVKMKRLHHFWEIVVQDGITLISKDEASGSSVTAEEAKKFLALKEKPAEDTAIYE
EGGDVDDLLDMI
Download sequence
Identical sequences G3T5U0
ENSLAFP00000008827 XP_003405959.2.64505 ENSLAFP00000008827

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