SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSLAFP00000010768 from Loxodonta africana 69_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLAFP00000010768
Domain Number 1 Region: 227-452
Classification Level Classification E-value
Superfamily vWA-like 1.26e-60
Family Integrin A (or I) domain 0.00019
Further Details:      
 
Domain Number 2 Region: 29-221
Classification Level Classification E-value
Superfamily vWA-like 5.5e-55
Family Integrin A (or I) domain 0.0002
Further Details:      
 
Domain Number 3 Region: 455-498
Classification Level Classification E-value
Superfamily Chicken cartilage matrix protein 2.22e-17
Family Chicken cartilage matrix protein 0.00062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000010768   Gene: ENSLAFG00000012878   Transcript: ENSLAFT00000012875
Sequence length 498
Comment pep:novel supercontig:loxAfr3:scaffold_34:9293059:9304881:-1 gene:ENSLAFG00000012878 transcript:ENSLAFT00000012875 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRVISGAGLALCGLLLLLQVPGTLGLAPQSRGNLCRTRPTDLVFVVDSSRSVRPVEFEKV
KVFLSQVIESLDVGPNATRVGVVNYASSVKQEFPLWAHNSKADLLQAVRRIQPLSTGTMT
GLAIQFAITKVFSDAEGSRVRSPDISKVVIVVTDGRPQDSVREVSAQAQASGIELFAIGV
GRVDKATLQQIASEPQDEHVDYVESYNVIEKLSKKFQEAFCVVSDLCATGDHDCEQVCIS
SPGSYTCTCREGFTLNSDGKTCSACNGGGGSSAIDLVFLIDGSKSVRPENFELVKKFINQ
IVDTLDVSDKLAQVGLVQYSSSVRQEFPLGRFHTKKDIKAAVRNMSYMEKGTMTGAALKY
LIDNSFTLSSGARPGAQKVGIVFTDGRSQDYINDAAKKAKDLGFKMFAVGVGNAVEDELR
EIASEPVAEHYFYTADFKTINQIRKKLQNKICVATEEDPCACESIVKFQAAVEGLLQALT
RKLEAVSKRLAILENRII
Download sequence
Identical sequences G3TA97
ENSLAFP00000010768 ENSLAFP00000010768

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