SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLAFP00000010789 from Loxodonta africana 69_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLAFP00000010789
Domain Number 1 Region: 5-174
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.24e-26
Family Beta-D-xylosidase C-terminal domain-like 0.081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000010789   Gene: ENSLAFG00000012889   Transcript: ENSLAFT00000012903
Sequence length 457
Comment pep:novel supercontig:loxAfr3:scaffold_17:4328145:4342976:1 gene:ENSLAFG00000012889 transcript:ENSLAFT00000012903 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TPLPQGVHLTESGVILTNDAYIELPLMKILPVNLVPPFTILIGLQSHRVNNAFLFSIRNK
NRLQLGVQLLPKKLVVYVGGKQPIFFNYSVHDELWHSFAISIRSKVVSMFVECGKKYFSR
ETFSEVQIFDSNSVFTLGSMNNNSVHFEGVVCQLDIIPSSEASANYCTYVKQQCRQADTY
WPETSLPRTTIVPSKILENSPLLKLFVEKVLSEHMMTDGKSIIQRIIHNDSVEADKQQDH
QVPRSQLTSLPLGNESAMDLVSRGIQGKEMITEEHIQTNLSLSVTHQHPSEARTNTKEKF
SSLNASNNITQHGDRETDLSPFKKVLSVLPHIEQDTIINIKKAITANLHTNELMEMQQIL
NTTLYRLTDEPSVDNHLGLKKEGEFDPDATYLMENSYETELYDYYYYEDLNTVLEMKNLI
GPKGDTGPPGPPGPAGLPGPAGKRGPRARHTRTAWKS
Download sequence
Identical sequences G3TAB2
ENSLAFP00000010789 ENSLAFP00000010789

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]