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  Home > Genomes > Loxodonta africana 69_3 > ENSLAFP00000011493

Domain assignment for ENSLAFP00000011493 from Loxodonta africana 69_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSLAFP00000011493
Domain Number 1 Region: 441-697
Classification Level Classification E-value
Superfamily YWTD domain 2.22e-60
Family YWTD domain 0.000000943
Further Details:      
 
Domain Number 2 Region: 1355-1612
Classification Level Classification E-value
Superfamily YWTD domain 3.92e-57
Family YWTD domain 0.00000311
Further Details:      
 
Domain Number 3 Region: 743-999
Classification Level Classification E-value
Superfamily YWTD domain 1.7e-55
Family YWTD domain 0.00000145
Further Details:      
 
Domain Number 4 Region: 1051-1303
Classification Level Classification E-value
Superfamily YWTD domain 5.89e-48
Family YWTD domain 0.00000319
Further Details:      
 
Domain Number 5 Region: 354-432,689-737
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000518
Family Growth factor receptor domain 0.017
Further Details:      
 
Domain Number 6 Region: 264-304
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000301
Family LDL receptor-like module 0.00065
Further Details:      
 
Domain Number 7 Region: 228-266
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000183
Family LDL receptor-like module 0.00082
Further Details:      
 
Domain Number 8 Region: 143-183
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000038
Family LDL receptor-like module 0.00062
Further Details:      
 
Domain Number 9 Region: 309-345
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000497
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 10 Region: 68-106
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000524
Family LDL receptor-like module 0.00078
Further Details:      
 
Domain Number 11 Region: 1309-1354
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000239
Family EGF-type module 0.0065
Further Details:      
 
Domain Number 12 Region: 187-225
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000458
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 13 Region: 104-142
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000471
Family LDL receptor-like module 0.00081
Further Details:      
 
Domain Number 14 Region: 1005-1058
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000733
Family EGF-type module 0.01
Further Details:      
 
Domain Number 15 Region: 26-68
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000157
Family LDL receptor-like module 0.001
Further Details:      
 
Weak hits

Sequence:  ENSLAFP00000011493
Domain Number - Region: 1612-1649
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000789
Family EGF-type module 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000011493   Gene: ENSLAFG00000013726   Transcript: ENSLAFT00000013730
Sequence length 1905
Comment pep:novel supercontig:loxAfr3:scaffold_21:2573809:2624904:1 gene:ENSLAFG00000013726 transcript:ENSLAFT00000013730 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MRRPWGALLLGALLCAHGLASSPECACGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDH
SDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFPCQNG
YCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDEE
SCPSAVPAPPCSLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSGEFMCDS
GLCINAGWRCDGDADCDDQSDERNCTTSMCTAEQFRCRSGRCVRLSWRCDGEDDCADNSD
EENCENTGSPQCASDQFLCWNGRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNV
NNGGCTQKCQMVRGAVQCTCHTGYRLTEDGRMCQDVNECAEEGYCSQGCTNSEGALQCWC
EAGYELRPDRRSFQGSGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRE
LVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANL
DGAHRKVLLWQNLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP
NGLTIDYAGHRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHT
KSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPPGKNRCGDNNGGCTHLCLPSGQNY
TCACPTGFRKISSHACAQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDW
DSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRI
EVANTDGSMRTVLIWENLDRPRDIVVEPMGGYMYWTDWGASPKIERAGMDASGRQVIISS
NLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQLPHPFGLTLYGERIYW
TDWQTKSIQSADRLTGLDRETLQENLENLMDIHVFHRQRPPVSTPCALENGGCSHLCLRS
PNPSGFSCTCPTGINLLSDGKTCSSGMNSFLIFARRIDVRMVSLDIPYFADVVVPINITM
KNTIAIGVDPQEGKVYWSDSTLHRISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYW
TDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAKLERSGMDGS
DRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIETADLNGASRHTLVSPVQHPYGLTL
LDSYIYWTDWQTRSIHRADKSTGSNVILVRSNLPGLMDIQAVDRAQPLGFNKCGSRNGGC
SHLCLPRPSGFSCACPTGIQLKGDEKTCDPSPETYLLFSSRGSIRRISLDTNDHTDVHVP
VPELNNVISLDYDSVDGKVYYTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVAR
NLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPRKGYLFWTDWGHIAKIERAN
LDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVSHVSHPF
ALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEGLMDIIVVSPQRQTGTNACGVN
NGGCTHLCFARALDFVCACPDEPDGQPCSLVPGLVPPAPRATSMSERRPGLHNTLPTTLR
SSASQTRTSLEEVEGRCSEKDARLGLCARSNEAIPAAPGEGLHVSYVIGGLLSILLILLV
IAALMLYRHKKSKFTDPGMGNLTYSNPSYRTSTQEVKIEAVPKPAMYNQLCYKKEGGPDH
NYTKEKIKIVEGICLLSGDDAEWDDLKQLRSLRGSLLRDHVCMKTDTVSIQASSGSLDDT
ETEQLLQEEQSECSSVHTAATAERRGSLPDTGWKHERKLSSESQV
Download sequence
Identical sequences G3TBV6
ENSLAFP00000011493 ENSLAFP00000011493

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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