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  Home > Genomes > Loxodonta africana 69_3 > ENSLAFP00000011643

Domain assignment for ENSLAFP00000011643 from Loxodonta africana 69_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSLAFP00000011643
Domain Number 1 Region: 509-647
Classification Level Classification E-value
Superfamily FAS1 domain 1.07e-29
Family FAS1 domain 0.002
Further Details:      
 
Domain Number 2 Region: 2217-2309
Classification Level Classification E-value
Superfamily C-type lectin-like 1.65e-28
Family Link domain 0.0001
Further Details:      
 
Domain Number 3 Region: 1473-1521,1599-1713
Classification Level Classification E-value
Superfamily FAS1 domain 1.57e-26
Family FAS1 domain 0.0024
Further Details:      
 
Domain Number 4 Region: 1715-1871
Classification Level Classification E-value
Superfamily FAS1 domain 6.28e-25
Family FAS1 domain 0.004
Further Details:      
 
Domain Number 5 Region: 965-1122
Classification Level Classification E-value
Superfamily FAS1 domain 8.5e-22
Family FAS1 domain 0.007
Further Details:      
 
Domain Number 6 Region: 2307-2469
Classification Level Classification E-value
Superfamily FAS1 domain 1.23e-16
Family FAS1 domain 0.0066
Further Details:      
 
Domain Number 7 Region: 387-499
Classification Level Classification E-value
Superfamily FAS1 domain 1.44e-16
Family FAS1 domain 0.007
Further Details:      
 
Domain Number 8 Region: 1130-1254
Classification Level Classification E-value
Superfamily FAS1 domain 0.0000000000196
Family FAS1 domain 0.0056
Further Details:      
 
Domain Number 9 Region: 1545-1582
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000869
Family Merozoite surface protein 1 (MSP-1) 0.058
Further Details:      
 
Domain Number 10 Region: 902-961
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000963
Family EGF-type module 0.032
Further Details:      
 
Weak hits

Sequence:  ENSLAFP00000011643
Domain Number - Region: 2104-2141
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000241
Family EGF-like domain of nidogen-1 0.031
Further Details:      
 
Domain Number - Region: 1371-1497
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000298
Family Growth factor receptor domain 0.02
Further Details:      
 
Domain Number - Region: 864-904
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00159
Family EGF-like domain of nidogen-1 0.088
Further Details:      
 
Domain Number - Region: 1977-2017
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00178
Family EGF-type module 0.087
Further Details:      
 
Domain Number - Region: 231-286
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00218
Family EGF-type module 0.066
Further Details:      
 
Domain Number - Region: 2145-2185
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00427
Family EGF-type module 0.081
Further Details:      
 
Domain Number - Region: 830-861
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00661
Family EGF-type module 0.042
Further Details:      
 
Domain Number - Region: 2018-2145
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0104
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number - Region: 278-310
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0157
Family EGF-type module 0.065
Further Details:      
 
Domain Number - Region: 323-359
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0176
Family EGF-type module 0.05
Further Details:      
 
Domain Number - Region: 199-232
Classification Level Classification E-value
Superfamily EGF/Laminin 0.027
Family EGF-type module 0.05
Further Details:      
 
Domain Number - Region: 1332-1371
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0534
Family EGF-type module 0.082
Further Details:      
 
Domain Number - Region: 730-770
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0963
Family EGF-type module 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000011643   Gene: ENSLAFG00000013893   Transcript: ENSLAFT00000013905
Sequence length 2579
Comment pep:novel supercontig:loxAfr3:scaffold_12:15092274:15121186:-1 gene:ENSLAFG00000013893 transcript:ENSLAFT00000013905 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MAGPRGLLLLCLLAFCLAGSNFIRGQKVSVTLCSMWTKFVTHTPCTPCVVVKRRVCPPGW
FRQFPEKISQDCSYEVQLGDTLLPMSGCSLDCWKEVVQKACCPGYWGSECYECPGGAETP
CNGRGTCLDGMTRNGTCVCQENFSGSACQECRDPSRFGPDCQSVCSCVHGVCSRGPRGDG
SCLCFAGYTGPRCDQELPVCQALSCPKNSQCSAEDPTCHCLPGHTQQGSECRAPDPCRPP
SPCAPSAQCSVSPTGKAQCRCREGYHGDGMVCLPQDLCTANNGGCPSNSTLCMYQWPGKV
SCSCKPGLVSISHNASAGCVALCFPHSCDRSATCQVTPDGKISCVCKEGEVGDGRACYGH
LLHEVRKSSQVGLVFLRLRAAVDMLDQGCRELLTTSGPFTVLVPSVVSFSKSVNESVAQQ
LCRQHVIAGQHVLEEGGPQTRRWWTLAGQLITVTFNSFVRKYTYTYEDQPQKTLSIQRPN
YPAANGVFHVVTTLRLEPPSGVPGDPKRTIGRILASTEAFSRFETILENCGLPSILDGPG
PFTVFVPSNEAVDNLRDGRLIYLFTDGLSKLQELVRYHIYNHGQMTTEKLISKGRVLTMA
NQVLAVNISEEGRILLGPQGVPLRQVDVLAANGVIHVLEGILLPPTILPILPKHCHEEQY
KIVLGSCVDCQALNTSACPPNSMELDIFPKECIYIHDPTGLNVLKRGCARHCNQTIIKPG
CCKGFFGPDCAQCPGGFSNPCYGKGNCSDGVRGNGACLCFPDYKGIACHICSDPKKHGDQ
CQEDCGCVHGLCDNRPGSGGVCQRGTCAPGFSGRFCNESLGDCGPTGLAQHCHQHARCVS
QEGVARCLCLDGFEGDGFSCTSSNPCSHTNRGGCSENAECVPGAPGAHSCKCHKGWSGDG
RVCVAIDECELDARGGCHADALCSYVGPGQSRCTCKLGFAGDGYLCSPIDPCRVGNGGCH
DLATCRAVGGGQRVCTCPLGYGGDGFSCYGDILRELEANAHFSVFSQWIKNASITLPADS
RITALVPSKSAIRGLSAEDRAFWLHPRMLPQLVRVHFLQGAYSEEELARLDGQDVATLSP
TTRWEIHNISGRVWVQNASVDVADLLATNGVLHTLSQVLLPPRGDVLQRQGLLQQLGSEP
AFSLFQELLQRHSLVPQIEAAPAYTIFVPTNRSLEAQGNSSSLDVDIVRHHVVLGEALSM
EDLRRGGHRNSLLGPAHWLVFYNHSGQPEVNHVPLEGPILEAPGRSLFGLSGVLKVGSSR
CLHSHAEALREKCINCTRKFRCTHGYQLQDTPRKSCLYRSGLSFSQGCSYTCAKKIEVPD
CCPGFFGTLCEPCPGGLGGVCSGHGQCQDRLLGSGECRCQEGFHGTACEMCELGRYGSNC
AGVCDCAHGLCQEGLNGDGSCVCNVGWQGLRCDQKITSPQCPKKCDPNANCIQNLAGAPA
CVCAAGYSGNGTHCSEVDPCAHDHGGCSLHANCTKVAPGQRTCTCQEGYTGDGELCEEAN
SCLIRHGGCHIHAECIPTGSQQVSCSCREGYSGDGVRTCEPLDPCSQHNGGCSPYAVCKS
TGDGQRTCTCDAAHTVGDGFTCRARVGLELLRDKHASFFTLHLLEHKELKGDGPFTIFVP
HSDLMTNLTLDDLARIRAHRQLVFRYHVVGCRQLGSQELLDTEYVTALSGHSLRFSEREG
IMYINDFARIVSSDHQAVNGVLHFIDRVLLPPDALHWEPDPAPTPQRNVTAAAESFGYKI
FSGLVTVLPVAGLLPLLRDVSHRPFTMLWPTDSALRALPPERQDWLYHEAHRDKLAAILR
GHVIHNVEALASDLPNLGPLRTMHGTPISFSCSRTRPGELMVGEDDARIVQRHLPFEGGL
AYGIDQLLEPPGLGARCDSFETRLMQKACSICGLEPPCPQGWKEQGSPEACWHFYTKFRP
HSSLRPWAQSSLWGRSSLWGRPSLWGHSQGLGRGCRRNCITTTWKPSCCSGHYGSECRAC
PGGPSNPCSNHGVCLDGMSGSGQCRCHSGFAGTACELCAPGAFGPHCQACRCTSHGHCDE
GLGGSGTCFCDEGWTGPHCEVQLELQPVCTPPCAPQAMCRVGNSCECSLGYEGDGHVCTV
VDLCQVGRGGCSEHANCSQVGTVVICTCLPDYEGDGWICQARNPCEDGHRGGCSEHADCL
STGPNTRRCECHAGFVGDGLQCLEEPEPPVDRCLGQPRPCHADAVCTDLHFQEKRAGVFH
LQATSGPYGLTFSEAKAACEAQGAVLASSPLSAAQQLGFHMCLVGWLANGSAAYPVVFRA
ADCGDGQVGIVSLGTRQNFSERWDAYCYRIQDVECQCRDGFVGDGTSMCNGKLLDVLAAT
ANFSTFYEMLLDYANATQRGLDFLDFLDDELTYKTLFVPVNEGFVDNITLSGPDLELHAS
NTTFLSTNASQGTLLPAHSGLSLVISDLGPGNSSRAPVVPGAVVVGSVIQWDIIAFNGII
HALASPLLTPPQPRAVLAHEIPPVAATVGAVVAIGALLSLVAGAIYLRARGKTAGFGFST
FQAEDDADDDFSPWQEGTSPTLVSIPNPVFGSHDAFSEPFDDSLLEEDFPDTQRILAVK
Download sequence
Identical sequences G3TC85
ENSLAFP00000011643 ENSLAFP00000011643

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.