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  Home > Genomes > Loxodonta africana 69_3 > ENSLAFP00000011960

Domain assignment for ENSLAFP00000011960 from Loxodonta africana 69_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSLAFP00000011960
Domain Number 1 Region: 2932-3150
Classification Level Classification E-value
Superfamily Fibrinogen C-terminal domain-like 1.44e-77
Family Fibrinogen C-terminal domain-like 0.00000249
Further Details:      
 
Domain Number 2 Region: 2758-2933
Classification Level Classification E-value
Superfamily Fibronectin type III 3.9e-21
Family Fibronectin type III 0.0000101
Further Details:      
 
Domain Number 3 Region: 1245-1332
Classification Level Classification E-value
Superfamily Fibronectin type III 1.97e-18
Family Fibronectin type III 0.0015
Further Details:      
 
Domain Number 4 Region: 2670-2758
Classification Level Classification E-value
Superfamily Fibronectin type III 3.77e-18
Family Fibronectin type III 0.0001
Further Details:      
 
Domain Number 5 Region: 2361-2449
Classification Level Classification E-value
Superfamily Fibronectin type III 6.64e-18
Family Fibronectin type III 0.0012
Further Details:      
 
Domain Number 6 Region: 1972-2057
Classification Level Classification E-value
Superfamily Fibronectin type III 1.07e-17
Family Fibronectin type III 0.0013
Further Details:      
 
Domain Number 7 Region: 1652-1735
Classification Level Classification E-value
Superfamily Fibronectin type III 1.18e-17
Family Fibronectin type III 0.0012
Further Details:      
 
Domain Number 8 Region: 1457-1540
Classification Level Classification E-value
Superfamily Fibronectin type III 1.97e-17
Family Fibronectin type III 0.0013
Further Details:      
 
Domain Number 9 Region: 1129-1214
Classification Level Classification E-value
Superfamily Fibronectin type III 2.3e-17
Family Fibronectin type III 0.0014
Further Details:      
 
Domain Number 10 Region: 2467-2557
Classification Level Classification E-value
Superfamily Fibronectin type III 2.75e-17
Family Fibronectin type III 0.0011
Further Details:      
 
Domain Number 11 Region: 1353-1443
Classification Level Classification E-value
Superfamily Fibronectin type III 3.21e-17
Family Fibronectin type III 0.0013
Further Details:      
 
Domain Number 12 Region: 2270-2354
Classification Level Classification E-value
Superfamily Fibronectin type III 9.57e-17
Family Fibronectin type III 0.0016
Further Details:      
 
Domain Number 13 Region: 1859-1942
Classification Level Classification E-value
Superfamily Fibronectin type III 1.25e-16
Family Fibronectin type III 0.0013
Further Details:      
 
Domain Number 14 Region: 1030-1116
Classification Level Classification E-value
Superfamily Fibronectin type III 2.54e-16
Family Fibronectin type III 0.0014
Further Details:      
 
Domain Number 15 Region: 831-919
Classification Level Classification E-value
Superfamily Fibronectin type III 6.28e-16
Family Fibronectin type III 0.00035
Further Details:      
 
Domain Number 16 Region: 2083-2175
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000241
Family Fibronectin type III 0.0013
Further Details:      
 
Domain Number 17 Region: 2573-2666
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000498
Family Fibronectin type III 0.00000501
Further Details:      
 
Domain Number 18 Region: 935-1017
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000883
Family Fibronectin type III 0.001
Further Details:      
 
Domain Number 19 Region: 1556-1638
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000705
Family Fibronectin type III 0.0017
Further Details:      
 
Domain Number 20 Region: 1748-1833
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000968
Family Fibronectin type III 0.0021
Further Details:      
 
Domain Number 21 Region: 747-831
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000122
Family Fibronectin type III 0.0012
Further Details:      
 
Domain Number 22 Region: 2173-2261
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000422
Family Fibronectin type III 0.0031
Further Details:      
 
Weak hits

Sequence:  ENSLAFP00000011960
Domain Number - Region: 316-340
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00105
Family Integrin beta EGF-like domains 0.047
Further Details:      
 
Domain Number - Region: 285-309
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00207
Family Integrin beta EGF-like domains 0.036
Further Details:      
 
Domain Number - Region: 254-278
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00293
Family Integrin beta EGF-like domains 0.07
Further Details:      
 
Domain Number - Region: 377-402
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00293
Family Integrin beta EGF-like domains 0.045
Further Details:      
 
Domain Number - Region: 192-216
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00481
Family EGF-type module 0.046
Further Details:      
 
Domain Number - Region: 471-495
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00795
Family Integrin beta EGF-like domains 0.043
Further Details:      
 
Domain Number - Region: 440-464
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00837
Family Integrin beta EGF-like domains 0.043
Further Details:      
 
Domain Number - Region: 223-247
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0151
Family EGF-type module 0.05
Further Details:      
 
Domain Number - Region: 409-432
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0272
Family EGF-type module 0.076
Further Details:      
 
Domain Number - Region: 502-525
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0398
Family Integrin beta EGF-like domains 0.073
Further Details:      
 
Domain Number - Region: 533-556
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0691
Family EGF-type module 0.056
Further Details:      
 
Domain Number - Region: 346-371
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0795
Family EGF-type module 0.078
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000011960   Gene: ENSLAFG00000014268   Transcript: ENSLAFT00000014283
Sequence length 3159
Comment pep:novel supercontig:loxAfr3:scaffold_138:1065334:1123044:1 gene:ENSLAFG00000014268 transcript:ENSLAFT00000014283 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MPAQCPLTTSLAFLVLLGTARAGPFSPRSNVTLPAPRPPPQPGGRTAVAGRENPSSQLYE
HTVEGGEKQVVFTHRINLPPSAGCGCPPGTEPPAPASEVQALRIRLEILEELVKGLKEQC
TGGCCSTAAQAGTGQTDVRSLCSLHGVFDLSRCACSCEPGWGGPTCSDPADATVPPSSSS
SPAALESCPDDCNDQGRCVRGRCVCFPGYTGPSCGWPSCPGDCQGHGRCVKGVCVCRLGF
SGDDCSQRTCPRGCSQRGRCEDGRCVCDAGYTGEDCGVKSCPRGCSQRGRCENGRCVCEP
GYTGEDCGVKSCPRGCSQRGRCENGRCVCDPGYTGEDCSTRSCTWDCGEGGRCVDGRCVC
WPGYAGEDCSTRTCPRNCRGRGRCEDGECICDAGYSGDDCGVRSCPGDCSQRGHCEDGRC
VCWPGYTGPDCGGRACPRDCRGRGRCENGVCVCNAGYSGDDCGVRSCPGDCRGRGRCESG
RCVCWPGYTGRDCGTRTCPGDCRGRGRCVDGRCMCNPGFTGEDCGSRRCPADCRGRGRCE
DGVCACNVGYEGEDCGALSCPGGCRGHXDCGQGRAPFQRLSPGAAGHRALCRAGQCVCVE
RLPRARLRHPDVPRGNCRGRGECQEGRCVLPKMATQARTVGKEVIYSDWGGWGMGTVRGT
IMTRGSKTMGHASRLDQPSDPCQTLCFRVKNPRPCCARVGMNHCPYSGLCPLSPTQRGGS
RSPDGPLDVALGREGCDDAAEVPAIEGMRMHLLEETTVRTEWTRAAGPVDAYEIQFIPTT
EGSSPPFTARVPSSASAYDQGGLAPGQEYQVTVRALRGTSWGPPASKTITTMIDGPQDLR
VVAVTPTTLELSWLRPLAEVDRFVVSYVSAGNQRVRLEVPPQADGTVLTDLMPGVEYVVT
VTAERGRAVSYPTSVRANTDRDGEKPDLSLVQPRLGELTVTDVTPSSLLLHWTVPEGTFE
SFVIQYKDRNGPQVVPVEGPQRSSLITSLDPGRKYKFVLYGLVGKKRHGPLVTEAKTALS
TAPDADSLGTPPHLGELWVTDPTPDSLRLSWTVPEGHFDSFTVQFKDRDGPRVVSVEGHQ
RSVTVTPLDPGQKYRFLLYGLLDKKRHGPLTTDGTTELPTVAPEPPLKPRLGELTVTDAT
PDSLHLSWTVPEGHFDYFMVQYRNGDGQPKAVRVPGHEDEVTILGLEPDQKYKMNLYGLH
GGQRVGPISAIGMTAPEEETPVPTEMEETPTPTEPTTEAPEHPEEPPRLGELTVTDATPD
SLHLSWTVPEGHFDHFLVQYRNADGQPKVVRVPGHEDEVTISGLEPDHKYKMNLYGLHRG
QRVGPVSAIGLTVPHKVMEETPTPTELTTEAPEPPEEPLLGELTVTGSTSDSLSLSWTVP
QGHFDTFTVQYKDRDGRPQVVRVRGEEREVTVQGLEPGRKYKMHLYGLHEGRRVGPVSTV
GLTVPTAASEPPFKPRLGELTVTDATPGSLRLSWTVPEGHFDYFTVQYRNGDGQPKVVRV
PGHEDEVTILGLEPDQKYKMNLYGLHGGQRVGPISVIGVTEPTTEAPEPAEEPLLGELTV
TGSTSDSLSLSWTIPQGHFNAFTVQFKDRDGRPQVVRVRGEEREVTVQGLEPRRKYKMHL
YGLHEGRRLGPVSAVGFTGTEEGSQPPLKPRLGELTVTDATPDSLHLSWTVPEGHFDHFL
VQYRNGDGQPKAVRVPGHEDEVTISGLEPDQKYKMNLYGLHGGQRVGPISAIGVTEPTTE
ALKPPEEPLLGELMVTGSTSDSLSLSWTVPQGSFDAFTVQFKDRDGRPQVVRVRGEEREV
TVQSLEPRHKYKMHLYGLHAGQRVGPVSAVGLTVPENDEVRMTTATPTATSEPPFKPRLG
ELTVTDATPDSLHLSWTVPEGHFDHFLVQYKNGDGQPKVVRVPGHEDKVIISGLEPDQKY
KMNLYGLHSGQRVGPISAIGVTGEWRVEAAGEDEVRTTPAIPTAAPEPPFKPRLGELTVT
DATPDSLHLSWTVPEGHFDHFLVQYRNGDGQPKAVQVPGHEDEVTISGLEPDQKYKMNLY
GLHGGQRVGPISVIGVTAPEKETPTPTEPTTEAPEPPEEPLLGELMVTGSTSDSLSLSWT
VPQGHFEAFTVQFRDRDGQPQAVRVGGEEREVTVQGLEPGRKYKLHLYGLHEGRRVGPVS
AVGTIAPMPTEPPKEPRLGELSVAAVTLDTVHLSWTVAQGPFDSFLIQYRDVQGQLQTVP
AGRELREVTVLDLEAARKYKFLLFGLQDGKRRGPVSVEAKTLSDVKPSPRLGELTVTDVT
PDSVGLSWTVPEGEFDSFMVQYKDKDGQPQVVPVAADQREVTVPSLEPNRKYKFLLYGLA
GRKRLGPVSADGTTAPLKEEQPPPRLKELTVTDKTSDSLRLSWTVAQGSFDSFVVQYRDT
DGQPKLVPVAGDQHKVTVDGLEPGRKYKFLLYGLLGGKRLGPVSVLGVTAPEEDTPATWH
PATEAPEPPEEPRLGALAVTDVTPDSLHLSWTVAQGPFDSFVVQYQDADGQPQALLVGNN
QHKVLVSGLEPSTTYKFFLYGLREGARLGPISAEATTGPAPAGQTPGEPGPHLSQLSVTD
VTTSSLRLNWEAPPEAFDSFLLRFGVPSLSTLEPHSRPLLQREQTVPGALRSAVLRDLRP
GTLYSLTLYGLRGPHKADSIQGTARTLNPVLESPRDLQFSDIGETSAMVNWMPPLSRADS
FKVSYQLADGGEPQSMQVDGRARTQKLQGLIPGARYEVTVVSVRGFEESEPLTGFLTTVP
DGPTQLRALNLTEGSALLHWKPPQAPVDKYNVQVTASGAPSQQGSAPGSAVDYPLYDLVL
HTNYTATVRGLRGPNLTSPASITFTTGLEAPQGLEAKEVTPRTALLTWTEPPVPPTGYLL
SFDTPGGQTQEILLPGGITSHQLQGLFPSTPYSVQLRAVWGQSFSPPVSTTFITGGLQIP
FPRDCGEEMQNGAGTSRTTTIFLNGNRERPLNVFCDMETDGGGWLVFQRRMDGHTDFWRD
WEDYAHGFGNTSREFWLGNDALHSLTQAGDYSMRVDLRAGDEAVFAQYDSFQVDSAAEYY
RLHLEGYHGTAGDSMSYHSGSVFSTRDRDPNNLLISCAVSYRGAWWYRNCHYANLNGLYG
STVDHQGVSWYHWKGFDFSVPFTEMKLRPRSYRPPTWGG
Download sequence
Identical sequences G3TCY3
ENSLAFP00000011960 ENSLAFP00000011960

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.