SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLAFP00000012578 from Loxodonta africana 69_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLAFP00000012578
Domain Number 1 Region: 55-248
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 6.12e-34
Family Laminin G-like module 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000012578   Gene: ENSLAFG00000015016   Transcript: ENSLAFT00000015024
Sequence length 924
Comment pep:novel supercontig:loxAfr3:scaffold_0:95644798:95736985:1 gene:ENSLAFG00000015016 transcript:ENSLAFT00000015024 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKSCWKIPVFFFACSFLGPWASAAVKRRPRFPVNLNSSGDDALCPKIRIGQDDLPGFDLI
SQFQVDKAASRRAIQRVVGSTSLQVAYKLGSNVDFRIPTRRLYPSGLPEEYSFLTTFRMT
GSTLEKNWNIWQIQDSSGKEQVGVKINGQTKSVAFSYKGLDGSLQTAAFLNLPSLFDSQW
HKVMIGVERNTVTLFIDCNRIESLPIKPRGQISIDGFAVLGKLADNPQVSVPFELQWMLI
HCDPLRPRRETCHELPVRITPSQTTDERGPPGVQGPPGPPGPPGVPGIDGIDGERGPKGP
PGPPGLAGEPGKPGAPGKPGTPGADGVTGPDGSPGSVGPRGQKGEPGVPGPRGFPGRGIP
GPPGPPGATGLPGELGRVGSVGDPGRQGPPGPPGPPGPGGAIGFHDGDPLCPNSCPPGHS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEPGEVGAQGPPGAQGLRGITGIVGDK
GEKGARGLDGDPGPQGLPGAPGDQGRRGPPGEAGPKGERGAQGSRGIPGLPGPKGDTGLP
GVDGHDGIPGMPGTKGEPGKPGPPGDPGLQGLPGVPGIPGAKGIAGEKGNTGAPGKPGQL
GNSGKPGHQGPPGEVGPRGPRGIPGSRGVIGPAGPPGIPGKLGSPGSPGLPGFPGPPGLP
GMIGDRGLAGEPGPKGEQGASGEEGEAGGRGELGDIGLPGPKGSVGNPGEPGLRGPEGTR
GLPGEEGPRGPPGPRGVQGQQGATGLPGIQGPPGRGPTDQHIKQVCIRVMQEHLAEMASS
LKRPDSGAAGLPGLPGPPGPPGPPGENGFPGQIGLRGLPGIKGPPGALGLKGPKGNAGDL
GEKGERGPPGRGPKGLPGATGLPGDPGPASYGRNGRDGELGPPGPAGIPGVPGPPGPPGL
PGFCEPASCTVQAGQRAFSKGPNQ
Download sequence
Identical sequences G3TEC1
ENSLAFP00000012578 ENSLAFP00000012578

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]