SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLAFP00000023314 from Loxodonta africana 69_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLAFP00000023314
Domain Number 1 Region: 291-467
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.42e-59
Family SPRY domain 0.0000281
Further Details:      
 
Domain Number 2 Region: 3-80
Classification Level Classification E-value
Superfamily RING/U-box 4.48e-20
Family RING finger domain, C3HC4 0.0097
Further Details:      
 
Domain Number 3 Region: 96-155
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.000000000000504
Family B-box zinc-binding domain 0.0026
Further Details:      
 
Weak hits

Sequence:  ENSLAFP00000023314
Domain Number - Region: 141-244
Classification Level Classification E-value
Superfamily Apolipoprotein 0.0288
Family Apolipoprotein 0.0086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000023314   Gene: ENSLAFG00000028009   Transcript: ENSLAFT00000029424
Sequence length 468
Comment pep:novel supercontig:loxAfr3:scaffold_37:52777:54180:-1 gene:ENSLAFG00000028009 transcript:ENSLAFT00000029424 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
HSLMQVMEALAGIRAEANCLICLDYFRDPVTIKCGHSFCRSCIQQSWEDQQDWFRCPVCC
HPCLQLHLRSNTQLGNIAEIAKLLHITRSKRKREEETRLCKKHNQVLTHFCEEDLEVLCS
LCTQPPNHQDHFVRSIEEAASHHRKRLMSYMEPLKKQVADIQKLITTQDREPSELRKKVE
KQRKELFSEFEHLNKFLDREHEAALSRLAREEKHIQQNLNAKITAFSESISTLNSLLKEV
AEKSVMSEGKLLTDIQSLQNRCEGLNPPVLYSFQLTKEGCSLPPQYSALQKIIQKFKEDV
TLDPETAHSNLIVSEDKKSVTFVKKTQRLPPNPKRFNFDLVVLGREEFSSGRHYWEVEVG
EKPEWSVGLCKDSLSRKAKRPPGGQERCWAIHLCNGNYVAQGTFPVTLVITEKPREIGIY
LDYELGAISFYSLNDRSHIHSFTDRFSEILKPYFCIEHDSQPLTICAV
Download sequence
Identical sequences G3U656
ENSLAFP00000023314 ENSLAFP00000023314

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]