SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLAFP00000023409 from Loxodonta africana 69_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLAFP00000023409
Domain Number 1 Region: 95-191
Classification Level Classification E-value
Superfamily vWA-like 0.00000568
Family Ku80 subunit N-terminal domain 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000023409   Gene: ENSLAFG00000026019   Transcript: ENSLAFT00000031974
Sequence length 329
Comment pep:novel supercontig:loxAfr3:scaffold_26:24676182:24683611:-1 gene:ENSLAFG00000026019 transcript:ENSLAFT00000031974 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEVAEPSSPTEEEEEEEEQSAEPRPRTRSNPEGAEDRALGTQANVGSRSEGEGEAASADD
GTPNPPGAGPKPWQVPPPAPEVQVRTPRVNCPEKVIICLDLSEEMSLPKLESFNGSKTNA
LNVSQKMIEMFVRTKHKIDKSHEFALVVVNDDTAWLSGLTSDPRELCSCLYDLETASCST
FNLEGLFSLIQQKTELPVTENVQTIPPPYVVRTILVYSRPPCQPQFSLTEPMKKMFQCPY
FFFDVVYIHNGADEKEEEMSWKDMFAFMGSLDTKGTSYKYEVALAGPALELHNCMAKLLA
HPLQRPCQSHASYSLLEEEDEAAEVEATV
Download sequence
Identical sequences G3U6F1
ENSLAFP00000023409 XP_003413081.1.64505 XP_010591536.1.64505 ENSLAFP00000023409

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]