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  Home > Genomes > Loxodonta africana 69_3 > ENSLAFP00000028736

Domain assignment for ENSLAFP00000028736 from Loxodonta africana 69_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSLAFP00000028736
Domain Number 1 Region: 2770-2934
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.7e-36
Family Laminin G-like module 0.0000000729
Further Details:      
 
Domain Number 2 Region: 2938-3120
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.41e-35
Family Laminin G-like module 0.000000027
Further Details:      
 
Domain Number 3 Region: 2339-2525
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.88e-30
Family Laminin G-like module 0.0016
Further Details:      
 
Domain Number 4 Region: 2522-2712
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 9.39e-27
Family Laminin G-like module 0.016
Further Details:      
 
Domain Number 5 Region: 2154-2330
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 9.79e-24
Family Laminin G-like module 0.001
Further Details:      
 
Domain Number 6 Region: 817-869
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000234
Family Laminin-type module 0.013
Further Details:      
 
Domain Number 7 Region: 867-921
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000795
Family Laminin-type module 0.0025
Further Details:      
 
Domain Number 8 Region: 1479-1531
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000137
Family Laminin-type module 0.019
Further Details:      
 
Domain Number 9 Region: 1422-1473
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000206
Family Laminin-type module 0.016
Further Details:      
 
Domain Number 10 Region: 920-966
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000363
Family Laminin-type module 0.0044
Further Details:      
 
Domain Number 11 Region: 759-811
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000698
Family Laminin-type module 0.0058
Further Details:      
 
Domain Number 12 Region: 289-348
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000145
Family Laminin-type module 0.037
Further Details:      
 
Domain Number 13 Region: 1062-1110
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000695
Family Laminin-type module 0.017
Further Details:      
 
Domain Number 14 Region: 969-1018
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000642
Family Laminin-type module 0.014
Further Details:      
 
Domain Number 15 Region: 346-418
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000209
Family Laminin-type module 0.022
Further Details:      
 
Domain Number 16 Region: 416-473
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000218
Family Laminin-type module 0.059
Further Details:      
 
Domain Number 17 Region: 1016-1059
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000502
Family Laminin-type module 0.012
Further Details:      
 
Domain Number 18 Region: 1529-1569
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000586
Family Laminin-type module 0.014
Further Details:      
 
Weak hits

Sequence:  ENSLAFP00000028736
Domain Number - Region: 91-169
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.000162
Family APC10-like 0.053
Further Details:      
 
Domain Number - Region: 1122-1165
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000363
Family Laminin-type module 0.019
Further Details:      
 
Domain Number - Region: 1380-1406
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000837
Family Laminin-type module 0.064
Further Details:      
 
Domain Number - Region: 1700-1786,1817-1885
Classification Level Classification E-value
Superfamily Apolipoprotein A-I 0.00107
Family Apolipoprotein A-I 0.012
Further Details:      
 
Domain Number - Region: 1836-1940
Classification Level Classification E-value
Superfamily ADP-ribosylation 0.00127
Family ADP-ribosylating toxins 0.034
Further Details:      
 
Domain Number - Region: 486-522
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0026
Family Laminin-type module 0.01
Further Details:      
 
Domain Number - Region: 2017-2132
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 0.00772
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.029
Further Details:      
 
Domain Number - Region: 724-761
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0391
Family EGF-type module 0.05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000028736   Gene: ENSLAFG00000003130   Transcript: ENSLAFT00000027292
Sequence length 3121
Comment pep:novel supercontig:loxAfr3:scaffold_0:31343202:31433533:-1 gene:ENSLAFG00000003130 transcript:ENSLAFT00000027292 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MPGAAGGLLLLLLAGLGRLGGGQTQRAQQQRQPQAHQQRGLFPAVLNLASNAVITTNATC
GEKGPEMYCKLVEHVPGQPVRNPQCRICNQNSSNPYQRHPITNAIDGKNTWWQSPSIKNG
IEYHYVTITLDLQQVFQIAYVIVKAANSPRPGNWILERSLDDVEYKPWQYHAVTDSECLT
LYNIHPRTGPPSYAKDDEVICTSFYSKIHPLENGEIHISLINGRPSADDPSPELLEFTSA
RYIRLRFQRVRTLNADLMMFAHKDPREIDPIVTRRYYYSIKDISVGGMCICYGHARACPL
DPETNKSRCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDEN
VARRNLSLNIRGKYLGGGVCINCTQNTAGINCETCIDGFFRPKGVSPKYPRPCQPCHCDP
TGSLNEVCVKDEKHARRGLAPGSCHCKSGFGGVSCDRCARGYTGYPSCQSCNCSGIGSRN
EDPCFGPCNCKENVEGGDCSSCKPGFFNLQEDNHKGCDECFCSGVSNRCQSSYWTYSNIQ
DMSGWYLTDISGRIRVAPQQDDFDAPQQTSINNAEARLRLPQSYYWSAPAPYLGNKLTAA
GGQLTFTISYDLEEEEEDTERALQLMIILEGNGLRISTAQDEVYLLPSEEHINVLSLKEE
LFTIHGTNVPVSRKEFMTVLANLKRLLIQTTYSLGMDAIFRLSSVILESAVPYPTDGSIA
AAVEVCQCPPGYSGSSCESCWPRHRRVNGTIFGGICEPCQCFGHAESCDDVTAECVNCKD
HTSGPYCNECLPGFYGDPTKGTSEDCQPCACPLNIPSNNFSPTCHLDRSLGLICDECPVG
YTGPRCERCAEGYFGQPSIPGGSCQPCQCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYC
ELCADGYFGDAVDAKNCQPCRCNVNGSFSEVCHARTGQCECRPNVQGWKCNECKPETFGL
QSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDHCAHGYFKFQEGGCTACDCAH
LGNNCDPKTGRCICPPNTVGEKCSKCVPNTWGYSIISGCKVCNCSLVGSLDIQCNINTGQ
CKCHPKFSGAKCTECKLGHWNYPHCDLCDCFLPGTDGTTCDTETKKCSCSDQTGQCTCKM
NVEGVHCDRCRPGKFGLDAKNPLGCSSCYCFSATSQCSEAKGLIRTRVTLNPEQTILPLV
DEALQHTTTKGIAFQHPEIVAHMDLVKQDLHLEPFYWKLPEQFEGKKLMAYGGKLKYAIY
FEAREETGFSTYNPQVIIRGGTPAHARIIVRHMAAPLIGQLTRHEIEMTEKEWKYYGDDP
RISRTVTREDFLDVLYDIHYILIKATYGNIMRQSRISEISMEVAEKGRVTAVTPRAHLIE
KCDCPLGYSGLSCETCLPGFYRLPSELGGRTPGPTLGTCVPCQCNGHSSLCDPETSKCQN
CQHHTGGDFCERCALGYYGIVKGSPNDCRQCACPLISSSNNFSPTCVMEGLDDYRCSACP
RGYEGQYCERCAPGYTGSPRSPGGSCQECECDPHGSLPVPCDPVTGLCTCRPGATGQKCD
GCKHWHAREGMECVFCGDECTGLLLGDLARLEQMAMSINLTGPLPAPYKMLYSLENTTQE
LKHLLSPQRAPERLIQLAEGNLNTLVTEMNELLTRATKVTADGEQTGQDAERTNTRAKSL
GEFIKELVQDAEAVNDKAAKLNDTLGAQDKAFERNLQGLQKEIDQMMTELRRKNLDTQKE
AAEDELVAAEALLKKVKKLFGESRGKNEEMEKDLREKLADYNNKVDDAWDLLREATDKIR
EANRLSTANQKNMTALEKMKEALESGKRQTENTLKEGNDILDEANRLADGINSVIEYVED
IQTKLPPMSEELKDKIDGLSREIKDRNLAEKVSQAENHAAELNDSSTVLDGILDEAKNIS
FNATAAFKAYSNIKDYIDEAEKVAEEAKGLANEATELATGPQGLLKEGAKASLQKSFRIL
NEAKKLANNVKENDDHLNGLTNRLENASVRNGELLKALNDTLGKLSAIPNDTAVKLQAVK
DKARQANDTAKDVLAQIKDLHQNLDGLKKNYNKLADSIAKTNAVIKDPSKNSKIADADAT
VKNLEQEADRLIDKLKPIKELEDNLKKNISEIKELINQARKQANSIKVSVSSGGDCIRTY
KPEIKKGSYNHIVINVKTAVADNLLFYLGSAKFIDFLAIEMRKGKVSFLWDVGSGVGRVE
YPDLTIDDSYWYRIEASRTGRNGTISVRALDGPKASIVPSTYSSVSPPGYTILDVDANAM
LFVGGLTGKLKKADAVRVITFTGCMGETYFDSKPIGLWNFREKEGDCKGCTVSPQVEDSE
GTIQFDGEGYALVSRPIRWYPNISTVMFKFRTFSSSALLMYLATRDLKDFMSVELTDGRI
KVSYDLGSGMASVASNQNHNDGKWKSFTLSRIQKQANISIVDIDTNQEENIATSSSGNNF
GLDLKADDKIYFGGLPTLRNLSFNRPEVNLRKYSGCLKDIEISRTPYNILSSPDYVGVTK
GCSLENVYTVSFPKPGFVELAPVPINVGTEINLSFSTKNESGVILLGSGGTPAPPRRKRR
QTGQAYYAIFLNKGRLEVHLSTGARTMRKIVIKPEPSLFHDGREHSVHVERTRGIFTVQV
DEDRRHVQNMTVEQAIEVKKLFVGGAPLEFQPSPLRNIPPFEGCIWNLVINSVPMDFAQP
VSFKNADIGRCADQKPPEDEDGAVPAEILILPEPVPTPAFPTPTPVLAHGPCAVDSEPAL
LLGSKQFGLSKNSHIAIAFDDTKVKNRLTIEFEVRTEAESGLLFYMARINHADFATVQLR
NGLPYFSYDLGSGDTKTMIPTKINDGQWHKIKIMRIKQEGILYVDDASNRTISPKKADIL
DVVGMLYVGGLPINYTTRRIGPVTYSIEGCIRNLQMAEAPADLEKPTSSFHVGTCFADAQ
KGTYFDGTGFATAVGGFKVGLDLLVEFEFRTTRTTGVLLGISSQKMDGMGIEMIDEKLMF
HVDNGAGRFTAVYDAGIPGRLCDGQWHKVTANKIKHRIELTVDGNQVEAQSPNPASTSAD
TNDPVFVGGFPDGLNQFGLTTNIRFRGCIRSLRLTKGTGKPLEVNFAKALELRGVQPVSC
P
Download sequence
Identical sequences G3SRS1
ENSLAFP00000028736 ENSLAFP00000002610

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.