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Domain assignment for ENSLAFP00000025195 from Loxodonta africana 69_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLAFP00000025195
Domain Number 1 Region: 68-161
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.65e-35
Family SCAN domain 0.0000143
Further Details:      
 
Domain Number 2 Region: 660-716
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.55e-24
Family Classic zinc finger, C2H2 0.0052
Further Details:      
 
Domain Number 3 Region: 390-447
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.89e-23
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 4 Region: 603-660
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.53e-22
Family Classic zinc finger, C2H2 0.0075
Further Details:      
 
Domain Number 5 Region: 548-604
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.29e-21
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 6 Region: 432-484
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.14e-17
Family Classic zinc finger, C2H2 0.0078
Further Details:      
 
Domain Number 7 Region: 701-753
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.43e-16
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 8 Region: 510-561
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000594
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000025195   Gene: ENSLAFG00000030303   Transcript: ENSLAFT00000028217
Sequence length 760
Comment pep:novel supercontig:loxAfr3:scaffold_4:20978456:20987577:-1 gene:ENSLAFG00000030303 transcript:ENSLAFT00000028217 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
HSLPLSVLIPGPSFHSSPRGGHWPQRSLPILPMRPAALGPPGHTPLEDEGPITMKLEDSE
EESEAAPWDPSPEAARLRFRHFRYQEMAGPHEALAQLRVLCRQWLRPEARSKEQMMELLV
LEQFLGSLPLEIQAHVRGQWPSSPEEAVALVEGMHREQGGPRRWVTVQLQGQEVLSEKME
PSNFQPQTQEPGPEITPGAMPESPLGFQVKEEPEVTEDPVLLESKPLAASQKAMPVLLPE
QSQGSEIVLGQASPHSEAGPEGPSWREHPGALWQEEAGGIFSPGFALRMDGVPTGPITVS
PHLDVPWDLGVASLTGQIQSPSPEGGLTHALMLPSDPGGEQESGGKDSSQDAGPPPATAR
WRAPKGRSRGRPSTGAGTVRDGRCEVCGKVFSQRSNLLRHQKIHTGERPFVCGECGRSFS
RSSHLLRHQLTHTEERPFVCSDCGRGFVRSARLEEHRRVHTGEQPFCCTECGQSFRQRSN
LLQHQRIHGDPPGPGAAPPAPPSAPEPPGPFPCSECRESFTRRAVLLEHQAVHTGDKSFG
CVECGERFGRRSVLLQHRRVHSSDRPFACAECGQSFRQRSNLTQHRRIHTGERPFTCAEC
GKAFRQRPTLTQHLRVHTGEKPFACPECGQRFSQRLKLTRHQRTHTGEKPYHCSECGMGF
TQVSRLTEHQRIHTGERPFACPECGQSFRQHANLTQHRRIHTGERPYACPECGKAFRQRP
TLTQHLRTHCREKPFACQDCGRRFHQSTKFIQHQRVHSAE
Download sequence
Identical sequences G3UBI7
ENSLAFP00000025195 ENSLAFP00000025195

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