SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|313125993|ref|YP_004036263.1| from Halogeometricum borinquense DSM 11551

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|313125993|ref|YP_004036263.1|
Domain Number 1 Region: 7-189
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.14e-40
Family GHMP Kinase, N-terminal domain 0.00024
Further Details:      
 
Domain Number 2 Region: 194-342
Classification Level Classification E-value
Superfamily GHMP Kinase, C-terminal domain 8.39e-27
Family Mevalonate kinase 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|313125993|ref|YP_004036263.1|
Sequence length 345
Comment mevalonate kinase [Halogeometricum borinquense DSM 11551]
Sequence
MPAESSNMTVSSAPGKVYLFGEHAVVYGEPAVPCAIERRATVSVETREDSRVRVSAPDLS
LDGFTVEYGGNGDERPDVNVSEGLVEAGIEYIDVAVEQARDAANAPNAGFDVTVESDIPL
GAGLGSSAAVVVASIDAATRELGHPLDPEELAARAYRAEYEVQDGQASRADTFCCAVGGA
VRVEGDDCQHIDAPSLPFVVGFDGGAGDTGKLVAGVRSLRDEYDFAADTVESIGDLVRRG
ESVLAEADPTDHPPEDVLAELGRLMDFDHGLLEALGVSSRTLDNMVWAAREAGAHGAKLT
GAGGGGCIVALDETAETETALRYTAECEDVFRAELARDGVRVEDE
Download sequence
Identical sequences E4NR82
gi|313125993|ref|YP_004036263.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]