SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|330834000|ref|YP_004408728.1| from Metallosphaera cuprina Ar-4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|330834000|ref|YP_004408728.1|
Domain Number 1 Region: 372-763
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 4.95e-113
Family DNA polymerase I 0.0000000326
Further Details:      
 
Domain Number 2 Region: 2-131,163-367
Classification Level Classification E-value
Superfamily Ribonuclease H-like 2.34e-69
Family DnaQ-like 3'-5' exonuclease 0.0000542
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|330834000|ref|YP_004408728.1|
Sequence length 776
Comment DNA polymerase II [Metallosphaera cuprina Ar-4]
Sequence
MDLSYDVFNGIPEIYIWGIDKDDHRVAIIEKNFRPYFYVLIKDDVPIDEAIDQLKTISKA
QSPVTSVSKQNMRYFGKPVNVLRVETVIPAFVRVYREEVSKFKWVAAVLEADIRFYMRYS
IDSQVRPFYWLRAEVDEIKRDDLRVHKVYELKSIESVYEDRFPNLRTLAFDIEVLNKYGS
PNPRRDPIIVIGVWTDKEYKQFINSDNDDLKIIREFSKFVLDYDPDIILGYNTNGFDWQY
LLDRLASRNVKLDVGRKTNSEPSQGTYGHYSIVGRLNVDLYGFAESLTEVKVKSLENVAD
YLGVYPKDKRVNLEWYQIPEYWEDPKKRDILLKYNLDDAKTTYLLKNVFLTFGEQLTVIS
GLPLDQLCMASVGYRIEWLLMRESKKFNELIPNRVERKNESYKGGLVIEPKPGLHENVAV
LDFSSMYPSIMIKYNIGPDTLVQGECNDCWIAPEVGYKFRRDVNGFYRSILVSLLEERRK
VKSELANVNDEYERRRLDERQKALKVMANAMYGYMGWSSARWYSKEGAESVTAWGRELII
RASNIAKEAGFEVVYGDTDSIFVKGNMSDVDNLVSRITKELDLEIKIDKKYKKIFFTENK
KRYAGLTYDGKIDIVGFEAIRGDWCDIAKETQRVVIEKILLSGISEAVKAVKGVIMKMKR
KDFDIHGVIIWKSLDKSFEEYEVNAPHVIAAKKALNAGFAIDKLGKIGYIVMKGSGKISD
RVEPYFLVKDKNKIDVDYYIEKQIIPSVMRILEPFGIKEDNLKGVTTDIMDYFRDL
Download sequence
Identical sequences F4FYC5
gi|330834000|ref|YP_004408728.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]