SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Domain assignment for gi|330834275|ref|YP_004409003.1| from Metallosphaera cuprina Ar-4

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  gi|330834275|ref|YP_004409003.1|
Domain Number 1 Region: 14-136
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 0.00000000000000835
Family GHMP Kinase, N-terminal domain 0.0056
Further Details:      
Domain Number 2 Region: 176-248
Classification Level Classification E-value
Superfamily GHMP Kinase, C-terminal domain 0.00000206
Family 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE 0.061
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|330834275|ref|YP_004409003.1|
Sequence length 262
Comment shikimate kinase [Metallosphaera cuprina Ar-4]
Download sequence
Identical sequences F4FZU0
gi|330834275|ref|YP_004409003.1| WP_013737017.1.2613

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]