SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for psu|LinJ33_V3.1580 from Leishmania infantum JPCM5 2.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  psu|LinJ33_V3.1580
Domain Number 1 Region: 769-850
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.00000311
Family Ubiquitin-related 0.014
Further Details:      
 
Weak hits

Sequence:  psu|LinJ33_V3.1580
Domain Number - Region: 78-109
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 0.00491
Family Synaptotagmin-like (S variant) 0.028
Further Details:      
 
Domain Number - Region: 656-704
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.0337
Family Ubiquitin-related 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) psu|LinJ33_V3.1580
Sequence length 852
Comment | organism=Leishmania_infantum | product=hypothetical protein, conserved | location=Lin.chr33:619738-622296(+) | length=852
Sequence
MASYNPAPLPVRFDSNVSLTLHQAFLSTAGVLLSDPVARVHVVTVKRLHASPPSSVSNAN
PRSCGNAAAEEGIRTVLNSKEVAKSKPHFFTAHPKFNETFNFTVAETSTLTSLSIPGKAL
PDRVNASAQCRRKREGGSSCSESVVDYVVVTIESVDGTVFYGEAYAPFSPHCASSAPAAS
PVRVMLAPRNAQDTADPLFLLDNALLEAKHLDDFGFVTMSWEVAVVPHGGALMGTEPPLT
SSAPSGNASPFPVGLTLRATWLARATAYVRGAHYTTSVEFGGQDRFIFSDPLQPLCLTLQ
GGSAETELRRAVFHCSVQSVVDPTKSHDVAVPLPLPPLTSASARNRDVRWAAPVRTINGV
DLGLLLVTMRVSSKPLSADPPRCPDAACTRINDPAHQEEYQHVAQLWGKSQPPQAPLGAY
QPIAWESQQHVAEAARRQLKRQCILEAQPTAEHVRHIFDVLMGRASLDGGVAQLAATFSG
KSVAEVTAGDLRELMVGCAFHAAQMSVQDAARFCFVALRRDVEDAVAAEEVQYIVDYCLL
EKTIEMPTGERKRLVADLFADVGTISYHDFAKYLLHNYAVWAALGVPLTVDESVSNVQRQ
HAALLHAPGSGAAVLDVAALPQPPRATTGAPVTTAAATATQGSAVALAAALSDPASSTMW
RTFVVRVAQAPQKAFSVTAHAADRISDIMAMVEKSTGIKAERQEWKMFSGGAEGAGVSSA
AAQKSLDPATLVGSTTLGLPSALRSRTAPFTSSTSGSNAAQEVWIYEAEEAVQVRFHVKD
RLHSTKDWQERLPVKEKVLKVRAAVQRRTLIPLSRCTLTVRHSNGMVTKLQDRHTLGHYH
LMSGDVIEVSHE
Download sequence
Identical sequences A4I922
XP_001468241.1.40037 gi|146097860|ref|XP_001468241.1| psu|LinJ33_V3.1580 5671.LinJ33.1590

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]