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Domain assignment for psu|LinJ34_V3.1540 from Leishmania infantum JPCM5 2.4

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  psu|LinJ34_V3.1540
Domain Number - Region: 136-181
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 0.0638
Family PLC-like (P variant) 0.081
Further Details:      
 
Domain Number - Region: 819-879
Classification Level Classification E-value
Superfamily RNA bacteriophage capsid protein 0.0817
Family RNA bacteriophage capsid protein 0.0063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) psu|LinJ34_V3.1540
Sequence length 995
Comment | organism=Leishmania_infantum | product=hypothetical protein, conserved | location=Lin.chr34:650225-653212(-) | length=995
Sequence
MRVLYGTPLPPGLVAPTRGELRLRIDQLILDDEVINHSPLVQLFEAPDSASAVAATDVGG
AETATASFSRSPNHFVVPVDYCSVGPIFWGETRPSAQGQPATPQLRRGPVTMVYPIKMAA
TQFGAYLERMTESPQQGVQLDVFVPSSYSGRPPVTVGRCRITLDTLQPGHPVKGWFPVMH
RRARLSAAEADLSKYVELAVGKVKLTVTVEYYPSSRQPSAEPTAATKHKRHEGKDGGHVP
LPRAKTRRSHRHPGRTGEDAAHPPTETSSTSTETAAAESPVSSLLSPAARETARRRGRHS
GHVGHHGTALLRDKSAVTHQLLQQGLRLRAQMEAAARGLSLDNFDSSTDMTANRHRGVGH
GHVSFEDVGTGALADDADEDISDGIGVVYTSADSDEEKFALQMQKDAEARDRRGIQQQQQ
STVPSSSPAAPAAVGQHLVRSSAVGAASETAVEVLPIANDGSVHGTRAAVELCFSNFSFA
QTSLTADLHKIRINVRLSSDITTLEPSSGPLSSFVHPVPVQQPFICLLFDVCSFFEDHSK
LVVEAYKVMSELELDNENDGWDVQGPRHVAKEELLGLSVIGLYRQSRAVVFRDPVADTSN
VFAQLDVRVRPHGVNHSTATSTVLDAPAQQQQHQHQASWNVVRGTINSSLRTPASDAVPP
SSIAACASDTRPAKENAVSVSKHKSSTERGHVQDASAGEEASSIAGTYPPHVSHSPVGNS
SSSTTRERRRLRVVVYSAAELPRVAVAQGRGHGAVTGSGVGHFPIISARPRSIPEAGVEG
VTSYAEPNSFVTIEEVYRVAETWCTKSKTAAPTSRGASAPSSSRQSIHNWYVDEARGGFY
DRSAVAKESSNPSYNYEVTLQLPEMTVPTGNGTAAAAVTHGLADVLDELQLAVWHSDLSR
QTFAASGTIVMNGGAGSGHSRSRGTGVRQQEEHFWECAAYMGTCRVDLRPLRYLKTLDGY
YRVVCERTPGSAVGPTSTDVESNTIGYVRLSVSLQ
Download sequence
Identical sequences A4I9V6
gi|146098985|ref|XP_001468525.1| XP_001468525.1.40037 5671.LinJ34.1380 psu|LinJ34_V3.1540

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