SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLAFP00000006334 from Loxodonta africana 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLAFP00000006334
Domain Number 1 Region: 250-317
Classification Level Classification E-value
Superfamily XPC-binding domain 3.14e-24
Family XPC-binding domain 0.0000183
Further Details:      
 
Domain Number 2 Region: 1-69
Classification Level Classification E-value
Superfamily Ubiquitin-like 7.6e-16
Family Ubiquitin-related 0.0000396
Further Details:      
 
Domain Number 3 Region: 152-208
Classification Level Classification E-value
Superfamily UBA-like 0.0000000000000535
Family UBA domain 0.00064
Further Details:      
 
Domain Number 4 Region: 334-385
Classification Level Classification E-value
Superfamily UBA-like 0.00000000000159
Family UBA domain 0.00044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000006334   Gene: ENSLAFG00000007533   Transcript: ENSLAFT00000007534
Sequence length 387
Comment pep:known_by_projection supercontig:loxAfr3:scaffold_6:52324000:52348168:-1 gene:ENSLAFG00000007533 transcript:ENSLAFT00000007534 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
VKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPKAVTT
PAPATPQQSNPATTAAVSSSTAAAVAQAPAPAPALAPTSTPTSITPASTTASSEPAPASA
TQQEKPTEKPTETPVAASPTSTDSTSGDSSRSNLFEDATSALVTGQSYENMVTEIMSMGY
EREQVIAALRASFNNPDRAVEYLLMGIPGDRESQAVVDPPQAASTGTPQSSAVAAAAATT
TATTTTTSSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQE
HFIQMLNEPVQEAGGQGGGGGGGSGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGL
VIQAYFACEKNENLAANFLLQQNFDED
Download sequence
Identical sequences G3T069
ENSLAFP00000006334 ENSLAFP00000006334

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]