SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLAFP00000016725 from Loxodonta africana 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLAFP00000016725
Domain Number 1 Region: 9-75
Classification Level Classification E-value
Superfamily Interleukin 8-like chemokines 2.1e-18
Family Interleukin 8-like chemokines 0.0000769
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000016725   Gene: ENSLAFG00000022427   Transcript: ENSLAFT00000021869
Sequence length 393
Comment pep:known_by_projection supercontig:loxAfr3:scaffold_43:643244:646683:-1 gene:ENSLAFG00000022427 transcript:ENSLAFT00000021869 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
PGQPRGMNKCEITCNKMTRPIPVKLLLRYEGNPESCGKPAIILVTKKHRLFCANPDEKWV
QEAMEHLDRQAAALTENGGTFEKLMGTGGPTATPAKWETYKYAVSEPKAAGESSGPELTP
PSQEAQNALGTSPELPTRVAISSGTKSPSTSKAEDEGPPPGPEGTELFNVAAVSTMTSTM
ITWQSSAAYQPGSGLWVEGTASEAPSTEAPSTEAHSTQDPSTEAPTISHPAPEDSVGAEG
QLVWVQEQSPMPENSPGSEEIGPIAAHTDAFLDWGPSSMAHTSVVPVSFVGTPSRERGAK
GSCAPKAEETIHTAMDPQRLGALITPIPDPQAATRRQAVGLLAFLGLLFSLGVAMFAYQS
FQGCSHRMAGEMVEGLRYGPLICGSNSYVLVPV
Download sequence
Identical sequences G3TNC5
ENSLAFP00000016725 ENSLAFP00000016725

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]