SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLAFP00000017811 from Loxodonta africana 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLAFP00000017811
Domain Number 1 Region: 100-180
Classification Level Classification E-value
Superfamily Ubiquitin-like 6.22e-36
Family Ubiquitin-related 0.0000204
Further Details:      
 
Domain Number 2 Region: 180-231
Classification Level Classification E-value
Superfamily Zn-binding ribosomal proteins 3.11e-18
Family Ribosomal protein L40e 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000017811   Gene: ENSLAFG00000008353   Transcript: ENSLAFT00000021814
Sequence length 232
Comment pep:known_by_projection supercontig:loxAfr3:scaffold_26:23530155:23540890:-1 gene:ENSLAFG00000008353 transcript:ENSLAFT00000021814 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDAPDSASGVFCSRVLSMVNADDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMN
ERFLHHTRTLVEMKRDLDSIFRRIRTLKGKLARQHPEAFSPDAEMQIFVKTLTGKTITLE
VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK
Download sequence
Identical sequences G3TQI0
ENSLAFP00000017811 ENSLAFP00000007002

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]