SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLAFP00000028958 from Loxodonta africana 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLAFP00000028958
Domain Number 1 Region: 324-578
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.49e-65
Family Nuclear receptor ligand-binding domain 0.0000000011
Further Details:      
 
Domain Number 2 Region: 252-329
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 8.46e-28
Family Nuclear receptor 0.0000102
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000028958   Gene: ENSLAFG00000013317   Transcript: ENSLAFT00000030899
Sequence length 584
Comment pep:known_by_projection supercontig:loxAfr3:scaffold_2:38405938:38410892:1 gene:ENSLAFG00000013317 transcript:ENSLAFT00000030899 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPCIQAQYGTTAPSAGAHDHLASDPLTPELSKSTMDLASPEAAPAAPTALPSFSTFMDGY
TGEFDTFLYQLPGTVQPSATSPASTAFKFEDFQVYGCYPGTLSGPLDETLSSSGSDYYGS
PCSVPSPSTPSFQPPQLSPWDGSFGHFSTSQTYEGLRAWTEQLPKASGPPQPPAFFSFST
HTGPSPSLAQSPLKLFPSQATHQLREGESYSMPAAFPGLAPTSPHLDGSGILDVPVTSAK
ARSGAPSGSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKR
RRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQPPDASPANLLTSLVRAHLD
SGPSTTKLDYSKFQELMLPRFGKEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFTELSPGD
QDLLLESAFLELFILRLAYRSKPAEGKLIFCSGLVLHRLQCARGFGDWIDSILAFSRSLH
SLVVDVPAFACLSALVLITDRHGLQEPRRVEELQNRIASCLKEHVSAVAGEPQPASCLSR
LLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIVDKILWTRFLS
Download sequence
Identical sequences G3UM99
ENSLAFP00000028958

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]