SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLAFP00000001628 from Loxodonta africana 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLAFP00000001628
Domain Number 1 Region: 345-470
Classification Level Classification E-value
Superfamily TIMP-like 4.45e-28
Family Tissue inhibitor of metalloproteinases, TIMP 0.072
Further Details:      
 
Domain Number 2 Region: 212-266
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000023
Family Laminin-type module 0.044
Further Details:      
 
Domain Number 3 Region: 157-209
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000356
Family EGF-type module 0.062
Further Details:      
 
Domain Number 4 Region: 275-315
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000391
Family Laminin-type module 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000001628   Gene: ENSLAFG00000001946   Transcript: ENSLAFT00000001945
Sequence length 485
Comment pep:known_by_projection supercontig:loxAfr3:scaffold_4:9180928:9188038:1 gene:ENSLAFG00000001946 transcript:ENSLAFT00000001945 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPVTIALLFLLSQATSDPCYDPGGRPRFCLPPVTQLASVTTSCPRACAPSPGVGLGLQAS
CNGSLALALGGPFLLTSISLRFCTPGPPALVLSAAWAEGGPWRLLWRRPAWPGALGGPER
VTFRAPPGPKASVVASHLLIELGGRAGLAAASVRGRCQCHGHAARCVARSRPPRCRCRHH
TTGPGCESCRPSHRDRPWRPATPQHPHPCLPCFCNQHAWRCRFNAELFRLSGGLSGGVCE
RCRHHTTGRHCHYCQPGFWRDPSQPITSRKACRACQCHPIGATGGVCNQTSGQCSCKLGV
TGLRCNRCGPGYQQSRSPRMPCQRIPEATTTLATTPSAYGSDPQCQNYCNASDTRVHMSL
RRYCLQDYILHVKVLAIEAAGPTWWRLAVRVLAVYKQRAQPVPRGGQDAWVPRADLACGC
LRLRPSIDYLLLGSAADGPDPARLVLDRHGLALPWRPRWARPLRRLQQEELAGGCRGLQP
PTPGP
Download sequence
Identical sequences G3SPJ0
ENSLAFP00000001628 ENSLAFP00000028963

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]