SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLAFP00000021463 from Loxodonta africana 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLAFP00000021463
Domain Number 1 Region: 99-113,161-400
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 8.65e-65
Family Nuclear receptor ligand-binding domain 0.0000242
Further Details:      
 
Domain Number 2 Region: 46-113
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 4.79e-20
Family Nuclear receptor 0.00057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLAFP00000021463   Gene: ENSLAFG00000021987   Transcript: ENSLAFT00000033541
Sequence length 400
Comment pep:known_by_projection supercontig:loxAfr3:scaffold_28:3415416:3422710:1 gene:ENSLAFG00000021987 transcript:ENSLAFT00000033541 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSSSMAATTPSTSRKESPGRWGLGEDLTGMAPSGEIVQGGEGTTAIYACNGCSGFFKRSV
RRRLIYRCQVGAGMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVRSEPG
SEPRLEPPAVTRPPAGPSPRGPTPVSAARALGPGALTPPGHHHFMASLITAETCAKLEPE
DADEHIDVTSNEPELPSSPYSSPPCSLDSIQETSARLLFMAVKWAKNLPVFSSLPFRDQV
ILLEEAWSELFLLGAIQWSLPLDSCPLLAPPEAPAASSSQGRLKLASMEIHALQETISRF
RALAVDPTEFACMKALVLFRPETRGLKDPENVEALQDQSQVMLSQHSKAHHPSQPVRFGK
LLLLLPSLRFITSERIELLFFRKTIGNTPMEKLLCDMFKN
Download sequence
Identical sequences G3U0V5
ENSLAFP00000021463 ENSLAFP00000021463

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]