SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Lacbi1|188035|estExt_GeneWisePlus_worm.C_20880 from Laccaria bicolor S238N-H82

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Lacbi1|188035|estExt_GeneWisePlus_worm.C_20880
Domain Number 1 Region: 15-149,180-216,316-409
Classification Level Classification E-value
Superfamily FAD/NAD(P)-binding domain 7.2e-53
Family FAD-linked reductases, N-terminal domain 0.0000297
Further Details:      
 
Domain Number 2 Region: 445-618
Classification Level Classification E-value
Superfamily Thioredoxin-like 1.01e-33
Family Glutathione peroxidase-like 0.00024
Further Details:      
 
Domain Number 3 Region: 219-322
Classification Level Classification E-value
Superfamily FAD-linked reductases, C-terminal domain 9.02e-29
Family PHBH-like 0.0000507
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Lacbi1|188035|estExt_GeneWisePlus_worm.C_20880
Sequence length 622
Sequence
MGEKRNTSLIKESNVDVLIIGAGPAGLMAANALAKSGVNVRIVDQRPDKVAAGQADGIQP
RTIESYGLAERLLREGNQMHMAAFYNPSASGGIELTDRVPDVTAPSARFPFEVTLHQGAI
EAIFLDSMESLGVKVCRPLIPTSIQVSEDDDQLKDVNSHPVRVSFFLERRFVNENLVVLR
NLNPFDDHEESEIVHAKFVIGADGAHSWVRKTLGLTMDGEQTDYIWGVVDMTPDTDFPDI
RNRCAIHSNNGSCMIVPREEDKVRLYVQLDDRNAVDEESGRVDKSKIGPHELLDATRKIF
HPYSFKTPESFDWWTIYIIGQRVASKFSVKDRVFIAGDACHTHSPKAGQGMNASMNDTHN
LAWKLTQVLRGWANLSLLQTYELERREYAQNLISFDRQFARLFSGKPRTEECMDGVSHED
FLKIFQTFSGFTSGIGIHYAPSPITDPSYQAHAKKLIIGQRLLPQIFVRAADSRPIEIQD
LLPADSRFKLLVFVGDSSDATRRDRIRRVAEDIRDVVRPYSPDGLTAVFEIIAISCTKKA
DVRHNELSELFGCHWSKILLDDKDVRGKQGGDGYVNYGIEPSVGAVVVVRPDGYVGMVAP
FENVKELGAYFVGFMKGLSPNM
Download sequence
Identical sequences B0CTK9
jgi|Lacbi1|188035|estExt_GeneWisePlus_worm.C_20880 29883.JGI188035 XP_001875068.1.58555

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]